Gene Plim_2065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2065 
Symbol 
ID9138768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2677704 
End bp2678525 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content54% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003630091 
Protein GI296122313 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAGA CCTTCACTCC ACCTGAAGAA TCTGCGCCAA TCATCGAACT GCGTGGCTGT 
TCGCGTGGTT TTGGTGCCAT GCAGGTGCTG CGCGACATCA GTCTGAATGT CTATCGTGGT
GAAACACTCG TGCTGATTGG CGAAAGTGGT TGTGGTAAGA GCGTCACGAC CAAATTGCTG
GCGAACCTGC TCGAACCAAG TTCTGGCGAA GTCTTTTGGA ATAGTCAGCC AGTCTCGCAG
ATGTCCGCTG AACAGATGCG TCGGGATCGC TTGAAACTGG GTTACCTGTT TCAAGGCGGC
GCCATGTTCG ACAGTCTCTC GGTCTATGAG AACGTGGTCT TCGGATTACG CGAGAACCGG
AAAATGTCGG AAGCCGACAT GCGGGAAATT GCCTTCACCA GGTTGCGGGA AGTTGGTCTG
CCAGCCAGTG CGGCTCAAAA GTTTCCCTCC GAGCTTTCTG GTGGTATGCG TAAGCGGGCT
GCACTTGCGA GAGCCTTGGC GATGTCTCCT GAAATTATCA TCTACGATGA ACCAACGACG
GGCCTCGACC CGATCATGAG TGACGTCATC AACGAGCTGA TTCTTCAGGC TCGCAGTGCC
CGCCCCGTCA CCAGCATTGT CGTGACCCAC GACATGACGA CCGTGAAGCG GGTAGCCACT
CGAGTGGTAA TGCTCTTTCC TCTGGCAAGA CTCCCTCAGA ACGAATCGCA GATCATTTTT
GAAGGGACAG CCGACCAGGC CTTTAATCAT CCCGACGAAC GTGTGCACGA CTTTGTTCAC
GGAATCTCCG GGAAACGTCT GCAGGAACTC TTTGCTGCCT GA
 
Protein sequence
MTETFTPPEE SAPIIELRGC SRGFGAMQVL RDISLNVYRG ETLVLIGESG CGKSVTTKLL 
ANLLEPSSGE VFWNSQPVSQ MSAEQMRRDR LKLGYLFQGG AMFDSLSVYE NVVFGLRENR
KMSEADMREI AFTRLREVGL PASAAQKFPS ELSGGMRKRA ALARALAMSP EIIIYDEPTT
GLDPIMSDVI NELILQARSA RPVTSIVVTH DMTTVKRVAT RVVMLFPLAR LPQNESQIIF
EGTADQAFNH PDERVHDFVH GISGKRLQEL FAA