| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2040 |
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| Symbol | |
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| ID | 9138743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 2648471 |
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| End bp | 2650858 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_003630067 |
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| Protein GI | 296122289 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAA AACGCCCAGG GGCACGACGC CCAACGCGCC GCCGCTCAGA CGATGTCGAG
AACTCGACTG AGACACCCAA GCCTGTGATT GAAGAGGTTT TTGAGGAAGT CGCAGGGCTC
CATCGCGAAT TTGATGGCGA GGAACCTCCC AAGCCAAAAC GGACGCGGAC TCCTCGGGCC
ACATCGACAG GCTCCCGCAG CGCTGGCGAT TCTTCGACCA GCGAATCGGC TCCCCGTGCC
GAACGACCTT CACGCCGCAA ACCGGTACCG GTCGATATCG AACCAGCGCC CGTAGCCGGG
AGTGCCATGT TCTACGATCC CGTCGATGAA TCTGACTTCA CACCATCGAC TCGATCCCGG
AAGTCGCCCG ACAATGCTGG TGCTGATGCA TTCCCAGCGA GCGAAGAGCA ACCGGCTGCA
ACACGGCGCC GACGTGCTCC CTCTCGAAGC CCTCGCGAAA CATCAGCAGA ATCCAGAACG
GATGATGCCC CTAGAACGCA AGATACCCCC AGAGTTCAAA ATACTCCCAG AGCCCAAGAA
GACAGCGACT TCGGCTCTGG CCTGGATGAC GTCGACTCGC CATCAAAATC GGCTGGTGCA
TCGAGATCTT CGCCCTCGAA TGAAGGTGAA TTTCCGCCGA GAGATGAAGC CTCTTCCCGC
ACTCAGCGGC CACGCCGGTC GGCAGCGAGA ACTGGTGGCG AAAGATCAAG TCGATACCAG
AGTCGCGGAG ACGGACCTGC CGACGAACCA ACTTCATTCG CACGTCGAGA TCGATCAGAA
GCCAGTGACA GATCGGAAGC CAGTGACTTT GAACCAGCAC CGCGTTCTGG TGAGTCTTCT
TCAGAGGCTT ACAATCGCGC CGGTGGTGAA GATGAGGGGC CAAGGTCAGG CTCTCGCGAT
GAGAGCAATT CGGTTGAAAA CTTTAATGAA TCAGGCTTTT CGGGCGAAAA CCCGAACGAT
GGCACGCCCG CGCGTCGCCA TGGTGGATTC AACGAAGGTG ATGAGGGAGG CGACCCAAAT
GATGGAGGTC GCCGTCGTCG CCGCAGGCGC CGTCGTGGTC GCGGTGGCCC AGATGGTGGC
CTGCAGGGCC CACAGGCACC CCGCGGACAG TTCGTTCCTC AGGGAAATAA TAATCCCCGC
GGCCGGAACA ACAACAATCG CTCACAAGGT GGTCACCAGC GAAATCAGGG AGGGAATCGT
CCCTATGATC AATCGCGACG AGGTCCACAA AATCCTCAGG ATCGCAATTA CAACTCTGCT
CCGCGCGGGC CGGAAGTGAT TGAGCCCACC AGTGGCGTGC TCGAATTGCA CCCCAAAGGC
TATGGATTCC TGCGCGACCC GAAAGCCGGT TATGTCTCGC AGGAAACCGA TCCGTTTGTG
TCAGCCACCA TCATTCAGAA GTTTGGTCTG CGTGAAGGTG TACTGATCCA GGGTGATATG
GTTCAGGGCA GCCGGGGGCA GGGCCCGCGT CTGCGAACAA CCGAGTATAT CGATGGCCGT
ACACCCGAAG ATTACGCACA AATCAAGGGG TTTGACGATC TCACACCAAT CAATCCCTTT
GAGCAGATCC GCCTTGAAAC AGGGCCCACC CCGATCACTA TGCGGATCAT GGATCTGCTG
ACACCGATCG GTAAAGGTCA GCGAGCACTC ATTGTGGCTC CGCCCCGCAG TGGTAAAACC
ATGCTGCTGC AGGAGATTGC CGATGCCGTC AGCAAGAATC ATCCGGAGAT CTATCTGATT
GTGCTGTTGA TCGACGAACG TCCTGAAGAA GTGACAGAAA TGCGTCGTCG CGTGCGCGGG
GATGTCATTG CCTCCTCGAT GGATCGTGAA GTCGAAAACC ATGTTCGCGT CAGCCAGTTG
ATCTTTGAAA GGGCCAAAAG GCTCACCGAG GCAGGACGGG ATGTCTTCAT TCTGCTTGAT
TCGATTACCC GAACGGCCCG CGCTTTCAAT AAATGGACAG GGAACACCGG TCGCACAATG
TCCGGCGGTC TGGACATCAA GGCCATGGAT ATTCCCAAGA AGATGTTCGG CCAGGCCCGT
CGTTTCGAAG AAGGGGGCTC ACTCACTGTT GTCGGGACGG CACTTGTCGA AACCGGCAGC
AAAATGGACG ACGTGATCTT CCAGGAGTTC AAGGGGACTG GCAACATGGA AATGGTGCTC
AGCCGAGACC TCGCAGATCG TCGCATCTGG CCTGCCATCG ATGTTTCAAA ATCGGGGACA
CGTCGCGAAG AAAAGATCCT CTCTCCCGAA GTGATGGAGG GGGTGACATT GCTCCGCCGC
AGTCTGATTT CTTTGAGCCC CGTGGAAGCG ATGGAGCAGA TGGTTCGTAT TCTCACCAAA
TACAAAACCA ACGAAGAGTT CCTCGCCAAG GTTCGTTCAA TCCTCTAA
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| Protein sequence | MTEKRPGARR PTRRRSDDVE NSTETPKPVI EEVFEEVAGL HREFDGEEPP KPKRTRTPRA
TSTGSRSAGD SSTSESAPRA ERPSRRKPVP VDIEPAPVAG SAMFYDPVDE SDFTPSTRSR
KSPDNAGADA FPASEEQPAA TRRRRAPSRS PRETSAESRT DDAPRTQDTP RVQNTPRAQE
DSDFGSGLDD VDSPSKSAGA SRSSPSNEGE FPPRDEASSR TQRPRRSAAR TGGERSSRYQ
SRGDGPADEP TSFARRDRSE ASDRSEASDF EPAPRSGESS SEAYNRAGGE DEGPRSGSRD
ESNSVENFNE SGFSGENPND GTPARRHGGF NEGDEGGDPN DGGRRRRRRR RRGRGGPDGG
LQGPQAPRGQ FVPQGNNNPR GRNNNNRSQG GHQRNQGGNR PYDQSRRGPQ NPQDRNYNSA
PRGPEVIEPT SGVLELHPKG YGFLRDPKAG YVSQETDPFV SATIIQKFGL REGVLIQGDM
VQGSRGQGPR LRTTEYIDGR TPEDYAQIKG FDDLTPINPF EQIRLETGPT PITMRIMDLL
TPIGKGQRAL IVAPPRSGKT MLLQEIADAV SKNHPEIYLI VLLIDERPEE VTEMRRRVRG
DVIASSMDRE VENHVRVSQL IFERAKRLTE AGRDVFILLD SITRTARAFN KWTGNTGRTM
SGGLDIKAMD IPKKMFGQAR RFEEGGSLTV VGTALVETGS KMDDVIFQEF KGTGNMEMVL
SRDLADRRIW PAIDVSKSGT RREEKILSPE VMEGVTLLRR SLISLSPVEA MEQMVRILTK
YKTNEEFLAK VRSIL
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