Gene Plim_2038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2038 
Symbol 
ID9138741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2641549 
End bp2642622 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content53% 
IMG OID 
ProductThioredoxin domain protein 
Protein accessionYP_003630065 
Protein GI296122287 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.571694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCTCTT CATGTCTGCA CTGTTCGAGC CAGGATTCAC AATCCCACTT CTGTTCCAAC 
CCAATCGTGG CCTTCCAGAA GGGCCTGCGA TCGATGGGAC TGGTTCTGCT GATCTTCATC
ACAACACAAT CGGCCTGGGC ACAGTATCCA CAGGGAGGAC ATCCACAGGG AGGGCAGGGA
AGTGTGTGGC TGGGCAGCTA TAACACAGCA CTCCAGGAAG CCAGCCGCAC AAACAAACCT
GTGCTGCTGC ATTTCTCAGC CACCTGGTGC GGGCCATGCC AACAGATGGA GCGGGGTGTC
TTTCCTCATC CTCAAGTTCA ACAGCTTTTG CGCACTTCTG TGGCTGCTGT GAAAGTTGAC
TCCGATCAGA ATCCACAACT CGTTCAACAG TATGGCGTCC GGGGGTTACC TGCCGATGTC
ATGATCGATC CTCGAAATGG CAAGGTTCTC CTGCATTCCG AGAACTATCT CGATGTCGGA
GCTTACACTT CGATGATTGG CGGAGTGGCT CAAAAATACT CGATGAGCCT GGCCCAGGCT
GCACCTGCCC AACGAATGCA GAACAAAGTA CCCGCGACAC TTCCCGGGAA TCAGAATTTT
GAGCGGAAAT CGGCCCCTTC ACAATCGATG GCCAATGCTG ATGATGTTGG ACTGGATGGA
TTCAGTCCGG TGGCATTGCA AAGAGCCAGA CAATGGATGC GAGGTGACAG CCGTTTCGCG
TGGGATCATC AGGGAATCAC CTACTTCATG GCTACAGAAC AAGAGCTGGC CGATTTCAAA
CTGACACCCG AACAGTTTGC ACCGAAACTT CTGGGATGTG ATCCCGTCGT GTTGTGGGAC
ACTACCAAAG CCGTCAGTGG TTCAACTCAG TTCGCAGCGT TTTATGATGA CAGTCTCTTC
CTCTTCGTTT CTCGCGAATC GCGTGATCGA TTCAAAGAGA ACCCACGTCG TTACATGCGA
ACCGAGCAAG TTCTTCGACG GACCGATGTG CAACGTCTCG TTCAGGCCCT GCCCGATGAG
TCCTCAGAAT CAACTCGTCA GGCTGAAAAC CCTGCGAAGA CCGAAGTCCG TTAA
 
Protein sequence
MLSSCLHCSS QDSQSHFCSN PIVAFQKGLR SMGLVLLIFI TTQSAWAQYP QGGHPQGGQG 
SVWLGSYNTA LQEASRTNKP VLLHFSATWC GPCQQMERGV FPHPQVQQLL RTSVAAVKVD
SDQNPQLVQQ YGVRGLPADV MIDPRNGKVL LHSENYLDVG AYTSMIGGVA QKYSMSLAQA
APAQRMQNKV PATLPGNQNF ERKSAPSQSM ANADDVGLDG FSPVALQRAR QWMRGDSRFA
WDHQGITYFM ATEQELADFK LTPEQFAPKL LGCDPVVLWD TTKAVSGSTQ FAAFYDDSLF
LFVSRESRDR FKENPRRYMR TEQVLRRTDV QRLVQALPDE SSESTRQAEN PAKTEVR