Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2038 |
Symbol | |
ID | 9138741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 2641549 |
End bp | 2642622 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Thioredoxin domain protein |
Protein accession | YP_003630065 |
Protein GI | 296122287 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.571694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCTCTT CATGTCTGCA CTGTTCGAGC CAGGATTCAC AATCCCACTT CTGTTCCAAC CCAATCGTGG CCTTCCAGAA GGGCCTGCGA TCGATGGGAC TGGTTCTGCT GATCTTCATC ACAACACAAT CGGCCTGGGC ACAGTATCCA CAGGGAGGAC ATCCACAGGG AGGGCAGGGA AGTGTGTGGC TGGGCAGCTA TAACACAGCA CTCCAGGAAG CCAGCCGCAC AAACAAACCT GTGCTGCTGC ATTTCTCAGC CACCTGGTGC GGGCCATGCC AACAGATGGA GCGGGGTGTC TTTCCTCATC CTCAAGTTCA ACAGCTTTTG CGCACTTCTG TGGCTGCTGT GAAAGTTGAC TCCGATCAGA ATCCACAACT CGTTCAACAG TATGGCGTCC GGGGGTTACC TGCCGATGTC ATGATCGATC CTCGAAATGG CAAGGTTCTC CTGCATTCCG AGAACTATCT CGATGTCGGA GCTTACACTT CGATGATTGG CGGAGTGGCT CAAAAATACT CGATGAGCCT GGCCCAGGCT GCACCTGCCC AACGAATGCA GAACAAAGTA CCCGCGACAC TTCCCGGGAA TCAGAATTTT GAGCGGAAAT CGGCCCCTTC ACAATCGATG GCCAATGCTG ATGATGTTGG ACTGGATGGA TTCAGTCCGG TGGCATTGCA AAGAGCCAGA CAATGGATGC GAGGTGACAG CCGTTTCGCG TGGGATCATC AGGGAATCAC CTACTTCATG GCTACAGAAC AAGAGCTGGC CGATTTCAAA CTGACACCCG AACAGTTTGC ACCGAAACTT CTGGGATGTG ATCCCGTCGT GTTGTGGGAC ACTACCAAAG CCGTCAGTGG TTCAACTCAG TTCGCAGCGT TTTATGATGA CAGTCTCTTC CTCTTCGTTT CTCGCGAATC GCGTGATCGA TTCAAAGAGA ACCCACGTCG TTACATGCGA ACCGAGCAAG TTCTTCGACG GACCGATGTG CAACGTCTCG TTCAGGCCCT GCCCGATGAG TCCTCAGAAT CAACTCGTCA GGCTGAAAAC CCTGCGAAGA CCGAAGTCCG TTAA
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Protein sequence | MLSSCLHCSS QDSQSHFCSN PIVAFQKGLR SMGLVLLIFI TTQSAWAQYP QGGHPQGGQG SVWLGSYNTA LQEASRTNKP VLLHFSATWC GPCQQMERGV FPHPQVQQLL RTSVAAVKVD SDQNPQLVQQ YGVRGLPADV MIDPRNGKVL LHSENYLDVG AYTSMIGGVA QKYSMSLAQA APAQRMQNKV PATLPGNQNF ERKSAPSQSM ANADDVGLDG FSPVALQRAR QWMRGDSRFA WDHQGITYFM ATEQELADFK LTPEQFAPKL LGCDPVVLWD TTKAVSGSTQ FAAFYDDSLF LFVSRESRDR FKENPRRYMR TEQVLRRTDV QRLVQALPDE SSESTRQAEN PAKTEVR
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