| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2027 |
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| Symbol | |
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| ID | 9138730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 2628279 |
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| End bp | 2629724 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | secretion protein HlyD |
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| Protein accession | YP_003630054 |
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| Protein GI | 296122276 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCCA CACAAATCAG TACCACACCC CAAGGCACAA TTGTGCCCGC TGGTGGGCAT
CATGATCAGC ATGACACTAC CCTGGGGCTA TGGAACGTCG GCGAAACGTG GCAAGCCCAG
AACTTTCCGG CACTCCAACT GGCCCAGCCG ATCAGTACGA TTCGCTGGAT CTCGACAGCA
CTATTGTGGG CGTTGCCCAT CAGTCTGATT GTCATGATGT TCGCCCCCTG GCAGCAATCC
GTTGTCGGTT CCGGGCGAGT GATCACTTAT GATCCCAATC ATCGCCTGCA GGAAATCGAT
GCTCCCATCG GAGGTCGCAT CACGAATATT CGTGCCGAGC TGGTGGAAGG GGCGATCGTC
AAAAAAGGCG AAGTCCTCAT GGATATTGAG GTCATCGACT CGGCTTTGAT TTTTCGCCTC
GAAGAACAGT TCATGGCCAC TCAGCGTAAA CTCGAGACCG AAAAGACCAT TGCCATTGCC
TACGAACAAC AGGTTCAAGC GTTTGAAGCC ATTCGCAACC AGACGGAACT TGCCCAGGAT
GAATTCATTA AAATGGCTGG GCAGAAGTTG CTTGCTGAGC AGCAGAACCT GAAAGCAGCG
ACCGCCGCCT ATGAGCAGGC CGAGAAGGAT CGCATTCGAC GCATTCAGCT CTTTGAACAG
AAGGTGGAAT CTCGATACGA AGTCGAAATT GCTGAGCGAA AAGCTCAAGA GGAACAGGCG
AAACTGGCAC AGGCCAATGC TTATGTTGAA GCAGCGAAGA GCGAGCTGTC GGCTAAAGAG
GCCGAGCGAC TTTACAAGAT TCGTGAGGCG ATCACCAAGA TTGACTCAGC ACGGGCCGTT
TATCAGAAGT CGTTGGGAGA TATCGCCAGT ACCGAGAAGG AGATCGCCGA TATCCAAGCT
AAACAAAAGT TGCAAGTACA GTCGGTGGTA GCCCCGATTG ATGGGTATGT CCTGCGACTG
ACAAACTTTC AGGGAGGAAA AATTATTTCG GCAGGCACGC CGCTTTTGGA ACTCGTTCCA
TTAACAGCAG ATCGCGCTGT CGAGATCAAG GTCGATGGAA ACGATGCACC GCTGGTCGCC
TCACTTTCTA AAGATGGCCA GCATCGCAAA GTCAGACTGC AATTTGAAGG CTGGCCTGCG
GTTCAATTTT CCGGCTGGCC TTCAGTCGCA GTCGGTACCT TCGGTGGTGT TGTCGCTGTC
GTCGATTCGA TGGATGATGG AATTGGTAAA TTTCGAGTGC TGGTATTGCC TGATCCGGAT
GAAACAAGGC CGTGGCCCAC AGCCAATGTC TTGAGGCAAG GGATTCGGGC CAGAGCCTGG
GTGTTGCTGG ATCGGGTCAC GATCGGGCAG GAACTCTGGA GACAACTCAA CGGATTCCCA
CCCGCTATTC AACTGGATGA TTATAAGAGT TCAACGGACG ACAAACTTCT TCGAGGGAAA
AAATGA
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| Protein sequence | MASTQISTTP QGTIVPAGGH HDQHDTTLGL WNVGETWQAQ NFPALQLAQP ISTIRWISTA
LLWALPISLI VMMFAPWQQS VVGSGRVITY DPNHRLQEID APIGGRITNI RAELVEGAIV
KKGEVLMDIE VIDSALIFRL EEQFMATQRK LETEKTIAIA YEQQVQAFEA IRNQTELAQD
EFIKMAGQKL LAEQQNLKAA TAAYEQAEKD RIRRIQLFEQ KVESRYEVEI AERKAQEEQA
KLAQANAYVE AAKSELSAKE AERLYKIREA ITKIDSARAV YQKSLGDIAS TEKEIADIQA
KQKLQVQSVV APIDGYVLRL TNFQGGKIIS AGTPLLELVP LTADRAVEIK VDGNDAPLVA
SLSKDGQHRK VRLQFEGWPA VQFSGWPSVA VGTFGGVVAV VDSMDDGIGK FRVLVLPDPD
ETRPWPTANV LRQGIRARAW VLLDRVTIGQ ELWRQLNGFP PAIQLDDYKS STDDKLLRGK
K
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