Gene Plim_2026 details

Gene Information

• Locus tag: Plim_2026
• ID: 9138729
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 2626157
• End bp: 2628166
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 53%
• Product: toxin secretion ABC transporter ATP-binding protein
• Protein accession: YP_003630053
• Protein GI: 296122275

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCCATCC GGCTCATGGA TCTGACGATC AGTGAAGTTC ATGCACTTGC GAAACATGGT 
GGTATCGCCC TTTGTCGCAC TGAACCAATT CCAACTGTGC CAATTCCAAA CGCCTCAGCT 
CCATCTTCGA AAGCCGCACC AGAACTGGCT GAGAGGCTGT TCGTCGTCTC GGGACGAAAA 
AAAACGCTGG CCATGGAGTT TGCTAATGAT CTTTACGGCA AAGATCTGCC CTGGCTCAAT 
TTCGTCCAGA GTTTTCCACA GGTTGCTGTG CGCTGTGTCG TTTTTGAGCC CAATATCGAT 
GGGTTGGGTG CCGGCCACGA GCACCACCAG CCTCCCTGGA AACGTCTGCT GCGCATGATC 
GCGCCAGAAA AAAATGAAAT CTGGACGATT TTCCTGATGG CATGTGCGGC TGGCCTGTTA 
TCAGTCTCGG CTCCATTGGC GGCTCAACAA CTCGTCCGCG CGGTGACTTT TGGTGGTGTC 
TTCCAGCCAA TTATCGTTCT GAGCATTATC CTTTTGGGGC TGTTAAGTCT GCTCGGCGCC 
TTCCAGATTC TGAAGATCTA CATCTCAGAA GTGATCCAGC GCCGCCTGTT CACGCGCATT 
ACTGCGGATC TGGCATGGCG GCTTCCTCGT GTCAAAGAAT CGGAATGGAT GCATCATGAC 
GGACAGGAAC TCGTCAATCG GTTTCTGGAA GTGGTGACAC TTCAGAAAGT CATCAGCAGC 
CTGCTGGTGG ATGGATTAGC GATCATTCTG GCGACAATTG TCGGTATGAC ATTGATGGCG 
TTCTATCATC CGTTTCTTCT CGGTTATGAC CTTGTCCTGA TTGTGCTGTT GTCGATCATC 
ATTTTGACAA TGGGGCGCGG AGGGGTGCGA ACTTCCATCG AAGAATCCAA CAATAAATAC 
ATGGCACTAG CCTGGTTCGA AGAACTGGTT CGCGTCCCCG CAATCTTCCG TACTCCTGAT 
GGTGCTGCTC TGGCTTGGCA ACGAAGCGAT GCGCTATGCA CACGTTATCT CAATGCGAGG 
CAAAGTCACT TTACGATTGT TCTCAGGCAA TACATTGCTC TAGCGATACT CCAGGCTGTG 
GCAGCAACCG CCCTGCTGGG TCTGGGTGGT TATCTCGTAC TTCGAGAACA ATTGACACTC 
GGCCAACTGG TTGCTGCCGA ACTGATCGTC GCCACTATTG TGGGTTCGTT TCTGAAACTG 
GGCAAGCACC TTGAAGAGTG GTTCGATCTC ATGGCAGCGG TGAATAAACT GGGCCATCTG 
TTCGACCTGC CTGTGACCCA GCAAAGAGGG GTCTTGTTGC CCGAATCACG CAAACCGATC 
GCTCTCGATA TGCGAAATGT TTCGTGGGGC CATTCGCCCG GTGTCGGTCA TTGGATGACT 
CCCCATTTGA CATGTGCTGT GACTCCGGGT TCATCGCTGG CCATTCTGGA TAATCAGCCG 
GAGCATCGGT CAAAAATTCT CTCGGCCCTG GCAGGTGAGG CCTACGAATT CGAGGGAATC 
ATCGAGCTCG ATGGTTTACC ACTGAATGAT CTTCGTAAAG ATCTTGTCAG ATCACAGGTG 
GCTTTCGTCC AGATGCCTGA GATTCTGTCT GCTTCCATTG CCACCAACGT CCATTTGCAT 
CGACCCGACG TCAGTGATCA GACCGTCAAG CGACGACTCG AAGATGTCGC ACTCATGGCT 
CGAATTGAAA CCTTACACGG TGGTATCCAT ACCGAACTAT CGGCCAAAGG CGACCCGCTT 
TCTTCAACAG AGCAGATGCA ACTGATGCTC GCACGAGCCA TGGCAGGCTC TCCGCGTCTG 
CTTCTGATTG ACGGATGGCT GGATGGCTTG CCCGACCACT TGCGGCAGCG TTTACTGGGC 
GTCCTCTTTG CGCCAGACAG AACGTGGACC ACGATCATCG CCACCTCCCG GCCCGATATT 
GCCGCGCTGT GCGACCAGAC CATCGAGATG GACAGTGCCG AATCTCGACC TTTGGAAGCA 
CCTCGTCAAC CATCCTTACC TGCGACCTAG 

 

Protein sequence

MAIRLMDLTI SEVHALAKHG GIALCRTEPI PTVPIPNASA PSSKAAPELA ERLFVVSGRK 
KTLAMEFAND LYGKDLPWLN FVQSFPQVAV RCVVFEPNID GLGAGHEHHQ PPWKRLLRMI 
APEKNEIWTI FLMACAAGLL SVSAPLAAQQ LVRAVTFGGV FQPIIVLSII LLGLLSLLGA 
FQILKIYISE VIQRRLFTRI TADLAWRLPR VKESEWMHHD GQELVNRFLE VVTLQKVISS 
LLVDGLAIIL ATIVGMTLMA FYHPFLLGYD LVLIVLLSII ILTMGRGGVR TSIEESNNKY 
MALAWFEELV RVPAIFRTPD GAALAWQRSD ALCTRYLNAR QSHFTIVLRQ YIALAILQAV 
AATALLGLGG YLVLREQLTL GQLVAAELIV ATIVGSFLKL GKHLEEWFDL MAAVNKLGHL 
FDLPVTQQRG VLLPESRKPI ALDMRNVSWG HSPGVGHWMT PHLTCAVTPG SSLAILDNQP 
EHRSKILSAL AGEAYEFEGI IELDGLPLND LRKDLVRSQV AFVQMPEILS ASIATNVHLH 
RPDVSDQTVK RRLEDVALMA RIETLHGGIH TELSAKGDPL SSTEQMQLML ARAMAGSPRL 
LLIDGWLDGL PDHLRQRLLG VLFAPDRTWT TIIATSRPDI AALCDQTIEM DSAESRPLEA 
PRQPSLPAT