Gene Plim_1987 details

Gene Information

• Locus tag: Plim_1987
• ID: 9138689
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 2579923
• End bp: 2582025
• Gene Length: 2103 bp
• Protein Length: 700 aa
• Translation table: 11
• GC content: 52%
• Product: hypothetical protein
• Protein accession: YP_003630016
• Protein GI: 296122238

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTTGA CTGCTCATAC AGGATGGATC ACCTTCTCAG ACTTGTGGCG AATAAGTTGC 
TCTTCCCGCT GGAGTCATTG CCTTGGTGGT TGTGGTCTGC TGGTGTTGAA CCTCATCTGT 
ACAACCCCGC TGGCAGCGCA ATCAACAACG ACAAACGCTC ATCTTCTCGC CCAGGTGACG 
ACCAAAAAAG CTCCACCCGA ACCGATCGAT CCGGCATCAT TGACGAGTAT CGAAGAGATC 
CAGAAGCTGC GACAGGTAAG CCAACTCAAG GATTTAGAAC TCCCCCGACC TGCCCAGCCT 
GCTGACATCC AGGTGTTTCT CAAAGCCATT GACTGGGCTT TGCGTCATGA GGAAATTCGC 
AACAGCACGC AACGAGATGC ACTTCTTCGA GTCACCAGAC AAGGGCTGAA TCGAGTCGCT 
GCCGCTGAGA AAAAACAAGC TCCCTGGTTG GCTCCCGGTG GACAGCATGT TCTGGGTTAT 
GTTTCGGAAG TCGACGAATC GATCCAGCCC TATTCGCTCT GGATTCCCGA AGGTTATCAG 
CAGGAAAGCG CGGATCGATG GCCACTCGAA GTCGTGCTTC ACGGCCGAGA CAATGATTTG 
AACGAAGTGA AATTCATTGA CCAGCATGAG GGAAAGACTC TCAAGCAGTC TCCGAAACAT 
TTTCGTCTGG AAGTTTTTGG CAGAGGAAAT AATGCCTATC GCTGGGCCGG AGAGACAGAT 
GTCTTCGAAG CGATCCGGGA TGTGACGAGG CGATTTCGCA TTGACGATCA GAGAATCAAC 
CTGTGGGGAT TTTCCATGGG TGGTGCCGGT GCCTGGCATC TGGGTGTCCA TCATCCGGAT 
CGATGGTCTT CTGTGGGAGC TGGTGCCGGC TTTGCTGATA CGATTGTCTA CCAGAAGCTC 
AAAGAGCCCA TCGAGTCTCC GCGTCGAGAG CTGTTGCGAA TCTACGATGC GATCGACTAT 
GCCCCCAATG CGGGATTAGT TCCCATGATT GGCTACGGTG GATCGGAGGA TCCTCAACTC 
GCGGCCGCAC AGACCATGCA GAAAGCGGCT CGTGAAGCGG GAGTGGAGAT CCCGGTATTG 
ATCGGGCAGG GGGTGGCACA CAAATGGCAT CCAGAATCCG AACAGGAGTT TCAGGCTTTT 
CATGATCGAT ATCGCCAATC GGGGCGCGTT CGTTTTCCAC TGAATCCGAA GATTCGCTTT 
ACGACCTGGA CAGTCAAATA CCCTGAAGCC GACTGGCTGA AAGTCATTCG ACAGGAGTTC 
CCTTACCAGA TTTCGTCGAT TGATGCGTAT ATAAAAAATG ACGCTGACCT TGTCGAAGTC 
TCGACGAAAA ACGTGGCGAT CCTGAGTGTG GATCGCCAGG CCGCCGAGTC GATCCGGATT 
GATGGCAGCG AGGTTATGCC TCTAAGGAAT GCTGCCGAAG GCTTGCTTCC CGACGTGTAT 
TACGAACTTC GTGGCAACGG TTGGAAACAA CTGGAGTACA AAGCCTCGCG CGATGTCGAG 
ATTAATGACA TGAGGCACAA GCATCATCGC CTGCAAGGCC CCATTGATGA CGCCTTTACT 
CAACCATTCG TGCATGTGAC GGGGAGCGGG CGGGCATGGA ATAGCAGTCA CGAGGCATAC 
ACGAACTGGT CTCTCAAAAG AAGTCAGCAG GAGTTTGATC GATGGCTGCG CGGGAGACCG 
CCGGCAATTG TGGATAACGG TCTGAGTGAT GAGATTCTTA TGGACAAAAA TCTGATTCTG 
TGGGGAGATC CCGGGTCAAA CACACTGATC GCACGAATTG TCGATCAACT TCCCATCGAA 
TGGACAAAAG ACAGAATTGT CGTGAACGGG AAAGAGTTTT CACCCCAGAA CCATGCCATC 
GCGATGATTG TGCCGAATCC ACTGAACTCG CTCAAATACG TTGTGATCAA CAGTGGTCAC 
ACATTCCATG AAGCTGAGTT CAAAGGTTCG AACGCTCAAT TATATCCTCG TCTGGGAGAT 
CTGGCGGTTA TTCGTTTTGA ACAGCAGGAA AACGGCAGTT TTCGGGAAGA AATCGTGGAA 
AATCTCATTC TCGACAGCCG GTGGCAAATT CCTCAGCAAC AACCCGCTGA TGCTCAAAAA 
TGA 

 

Protein sequence

MALTAHTGWI TFSDLWRISC SSRWSHCLGG CGLLVLNLIC TTPLAAQSTT TNAHLLAQVT 
TKKAPPEPID PASLTSIEEI QKLRQVSQLK DLELPRPAQP ADIQVFLKAI DWALRHEEIR 
NSTQRDALLR VTRQGLNRVA AAEKKQAPWL APGGQHVLGY VSEVDESIQP YSLWIPEGYQ 
QESADRWPLE VVLHGRDNDL NEVKFIDQHE GKTLKQSPKH FRLEVFGRGN NAYRWAGETD 
VFEAIRDVTR RFRIDDQRIN LWGFSMGGAG AWHLGVHHPD RWSSVGAGAG FADTIVYQKL 
KEPIESPRRE LLRIYDAIDY APNAGLVPMI GYGGSEDPQL AAAQTMQKAA REAGVEIPVL 
IGQGVAHKWH PESEQEFQAF HDRYRQSGRV RFPLNPKIRF TTWTVKYPEA DWLKVIRQEF 
PYQISSIDAY IKNDADLVEV STKNVAILSV DRQAAESIRI DGSEVMPLRN AAEGLLPDVY 
YELRGNGWKQ LEYKASRDVE INDMRHKHHR LQGPIDDAFT QPFVHVTGSG RAWNSSHEAY 
TNWSLKRSQQ EFDRWLRGRP PAIVDNGLSD EILMDKNLIL WGDPGSNTLI ARIVDQLPIE 
WTKDRIVVNG KEFSPQNHAI AMIVPNPLNS LKYVVINSGH TFHEAEFKGS NAQLYPRLGD 
LAVIRFEQQE NGSFREEIVE NLILDSRWQI PQQQPADAQK