Gene Plim_1966 details

Gene Information

• Locus tag: Plim_1966
• ID: 9138668
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 2556670
• End bp: 2557371
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 55%
• Product: ABC transporter related protein
• Protein accession: YP_003629995
• Protein GI: 296122217

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0254088
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCTGA TTCTCAACCA GATTCGCAAG GCGTATGTCA CGCCCACAGG TGCTGCGCAA 
GTGATTCTCG ATATTCCAGC CTTTTCGCTG GATCAGGGAG AACAGGTGGC ACTGGTCGGG 
ACGAGTGGCA GTGGCAAGAC GACTCTGCTG AATGTGGCTG CCGGCATTAC GACACCCGAT 
TCAGGAACGG TCACTGTCGG TGGGGTTGAG ATTACCCGAA TGCTCGAACC AGTTCGGGAT 
CGTTTTCGAT CGGAACGGAT TGGTTATGTC TTCCAGACAT TTAATCTTTT GGGAGCCTTC 
ACCGCACTCG AAAATGTTCT ATTGGGAATG AGTTTTTCCT CCCAGCCTGC CAATCGTCAT 
CTGGCAATCG AGTTACTGGG GCGCGTCGGG CTGGGAGATC GTCTGCATTA CCGGCCATCG 
CAGCTTTCTG TGGGCCAGCA GCAGCGGGTT TCAGTGGCTC GTGCATTGGC AAAAACGCCG 
CGGCTGCTCT TGGCTGACGA ACCGACAGCC AACGTCGACG GGCCCAATCA ACAGGCCATT 
CTGGAACTGA TGCAAACCAC TTGCCGCGAG AACAATGTCA CCTTGCTGCT GGTGACACAT 
ACGTCAGAAG TCGCCAGCCA ATTCAGCCGC GTCGAACGAC TTGCCAGTTT TAATCAGGCC 
GCAACCTCGA CATCGACACC GTACAGCATG GGAGTCAACT GA 

 

Protein sequence

MSLILNQIRK AYVTPTGAAQ VILDIPAFSL DQGEQVALVG TSGSGKTTLL NVAAGITTPD 
SGTVTVGGVE ITRMLEPVRD RFRSERIGYV FQTFNLLGAF TALENVLLGM SFSSQPANRH 
LAIELLGRVG LGDRLHYRPS QLSVGQQQRV SVARALAKTP RLLLADEPTA NVDGPNQQAI 
LELMQTTCRE NNVTLLLVTH TSEVASQFSR VERLASFNQA ATSTSTPYSM GVN