| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1957 |
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| Symbol | |
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| ID | 9138659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2542983 |
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| End bp | 2547302 |
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| Gene Length | 4320 bp |
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| Protein Length | 1439 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | heme-binding protein |
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| Protein accession | YP_003629986 |
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| Protein GI | 296122208 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.585406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACG TGATGAGAAA AACTTTCTGC TGGGCGCTTT CCATTCTGAT TGTGGCGATG
GCCCTTGATG CCAATCAATA TCAGACATCC AGGGGATGCG CCTTAGCCGA GGAAATCCCC
CCGACGACCG CACCCAAAGC TGCCAAAACT CTCAAGGCTT TGTTGGTCAC AGGGGGTTGC
TGCCACGACT ACCAGCGCCA GAAAAAGATT CTGACCGAAG GCATCTCGGC CCGCGCGAAT
GTGCAATGGG AGATTGTCCA TCAGGGGGGC AGCAGCACCA ATGCCAAGAT TCCGCTTTAT
GAAAATCCCG ACTGGGCTAA GGGCTTTGAC GTCGTCGTTC ATAACGAGTG CTTTGCCGAC
ATCCCTGATG CGAGTTGGAC ACAGAAGATT CTGGCACCGC ATAAGGCCGG TCTGCCGGCG
GTGGTGATTC ACTGTGCCAT GCACTGCTAC CGCGATAAAA CCGATGAGTG GTTCAAGTTT
CTGGGAGTGA CATCTCACGG GCATGGCGCT CACTATGCCT TTGAGGTCGT CAATGCCGTA
CCAGAACATC CCATCATGAA GGGGTTTGGT AACAAGTGGA TGACTCCCAA GGGTGAACTG
TACAACATCG CCAAAATAGG TGAGACCACA ACTCCATTGG CCTACGGCAA AAGCTCTGCC
AAAAAAGACG AATGTGTCAT CTGGGTCAAT GAATATGGCG ACAAGAAAAC TCGTGTCTTT
GGCACAACGG TGGGACACTA TGCCGAAGAA ATGCAGGATC CCGTGTTTCT CAATTATGTG
ACTCGGGGAC TCCTGTGGTC AGCCGATAAG CTGAATGATG ATTACCTGAT CTCGCAAGCC
TCGCCCCGAG TGATCAAAGT GCCAGAGAAT CTGGCCTTGG GGAAGACTGC CACAGCCTCT
GGTTCGCAGG CAGAACGTGA TCCGAAGTTT GCTGTCGACG GTGATGAAGA GACACGCTGG
TGTGCTCCGA ATGGCGGGTC TGATTACACG TGGCAAGTCG ATCTGGGAGA GCCAAAATCG
ATTGCAGGTA TCCGTATTGT CTGGGAAAGT CCCGAAGGGG GCTACAAGTT TCGAGTCGAG
ACTTCGGTCG ATGGGAAGGT GTGGGCACCT CTGATTGATC AGAGCCAAAA GGCTGTTCTC
GGCAGTGATG CCAGCTACCA AGTGACTGAA GATCAGGTCA GGCATGTGCG ACTGGTCTAT
CTGGGCAGCA CTCATGGGGG ATGGGGGAGC TTCTGGGAAT TCGAAGTTCA CTCGGGAAAA
ATGATTGAGC AGACGGTCGA TGCGGTGATT GATCTTAAAC CCAAAGCCGT GTCGGGAGAT
CCTCTGCTCA GTGGGGTCAA AGTACCACCA TCGTTTGAAG CGACGATCTT TGCTGCACCC
CCAGAGATTT CCTATCCCAC CTGTTTGACG ACATCACCAG ACGGATTGGT GTTTGTCGGT
GTGGATTTAA ATGGCTCGTT GGGTGCCAAG CCTCAAAAGG GAAAAATTGT TCGCTGCCGA
GATACGAATG GCGATGGAAA GGCCGATGAA TTCATCACCT TCTGTGAACT CGACAGCCCG
CGTGGCCTCG TGTGGGATGA TGGCACGTTG TACGTCCAGC ATCCTCCCTT TGTGACGGCC
TTCCATGATC GCGATGGTGA TGGAAAGTCT GAAAAGAGTG AGGTGCTGGT TGACGGGATT
GGTTTCGACC TGAAGTTCCG TGGTGCAGAC CATACCACCA ATGGCATGCA GATGGGAATT
GATGGCTACC TTTACATTGC CGTGGGTGAT TACGGCTTCT ATGAAGCGAA AACCAAGGAT
GGCAAAACCT TGCAACTGCA TGGTGGCGGT GTGGTCAGGG TTAAGCCCGA CGGCACTGAT
CTGGAGATTG TCTCCCGTGG TCAGCGGAAT ATTTACGACG TGGCCATCGA CCCCGAGATG
AATCTGCTCA CCCGAGACAA TACGAATGAT GGCGGCGGCT GGAATGTCAG ACTTTCGCAC
GTCGTGCCGT TTGGAAACTA CGGTTATCCC TCACAGTTCA TCAACTTTCC CGAAGACCGC
ATCGATTGTC TGGCCGATTT CGGTGGTGGT TCGCCCTGCG GATCGGTTTA CATTGATGAT
CCCGCTCTCC CCTCCCCGCT GGGACGCAGT TTCTATACGT GCGATTGGGG CCGCAGCATC
ATTTTCCGGC ATCCATTGAC ACCGGCAGGC TCCACTTTCA AAGTGGAACA AGAGCCATTT
GTGCACGTTC CTCGCCCGAC AGATATGGAG ATTGATGCTT CCGGAAAGAT CTACATTGCC
AGCTGGAAAA ATGGTGGCTT TGACTTCGAT AAACCCGATG TGGGCTATGT GCTGCTGCTG
ACTCCGCGAG GCACACAGCG AAGTGAGCAA TCACTCGACT TCAGTAAACT CTCGATGAAA
GAACTGGTCA CACTTGTAGG CCATGAACAA GGGGTGACTC GTCTGGCCGC TCAGCGTGAA
TTGCTCCGGC GTCCCGAGGC TTCACAGCAA GTTACTGCAC TGAAAAACCT GGCATTACAA
GTTGGCAGCG TGCCTAGAAC TGGCCGACTG GCGGCAGTTT TTACACTTGG TCAGATCGAC
ACGATTGAGG CCGTCAAAGC TCTCGAAGAG ATTTATGCAA AAGAGGATTG TCAAGAAGCT
GTCTTGCTGG CTTTGGGGGA TTCTCCCAAG GCTAACCAGG GATTCGTGGT GGCTGGTTTG
TCGTCGAATA ATCCTCGAGT GGTCAGGGCG GCACTGACGG CGATTGGCCG GCAACAATGG
ACAGCAGCCG CTCCTCAGCT TATTCCCGTC CTGGCGAACG ATGATGCTGT TGTGGCGCAT
GTCGCGAAGG AAGTTCTGGT CTCACTGCGA CCGATTGAGG TGATCGTCAA TGCTCTCGGA
ACCAATGATC CCCAGGTGTT TGCCGGTGTG ATCGACGTGG CCAAAAGGTT GCACGATCCA
CGGATTGTCA ATCGGCTTCT GGAACTCGTT TCGAGTGGAA CGGAACAACA GCAGCAGCTC
GTGCGGACAG CTCTCTGTCG GCTGCACTTC CAGGAAGCAC CATGGGATAA AAAATGGTGG
GGAACTCGTC CCGATACTAC GGGGCCTTAC TTTAAACCAG TCACATGGTC ACAAAGTGAT
CAGATTCGCA CGGCACTTGA GGCAGCTCTG GAAGCCGATT CTGGAGATAC GCTGAAGCAT
CTGGTGAAAG AGTTAAGGCG GCATCGAGTC CCTTCGCCCA GGATTGTGCC AGCTCTGCTG
AAACTGGCTC AGTCTGATCG CAACTTTTAT TCGCAGGCCA TTCTACTGTT GGCATCGACC
GATGATCGAA CAAGTCCTAC GTTGGATCTG CTTTCGACGG CTGCACTTTC AGAGTCAAAT
GACTGGGCAA CGCGATCAGC AGCGATTCGT GGCCTGATGA CCCGACTTCC TGATCCACAG
GCTGCCAAGG GCTTGCTGGC AACCTTTGGT AGAACCGTTC CCAGTGATGA GCTGCCCAAC
GATCAGGTAA GTTTGTGGAC AGAGTATCTG CAGGATGCCC GGCATGCCGA GATTGTCCCT
CTGCTGACCG AAAGAGCGTT TGATGCTCAG GCTGGTGAAC AGGAAGTGGC CTGGTCGGTG
CTTCTTTCGC TGGTCGAAGC TTCGCGAACA CCAGCCGCTG TGCGTGATCA GATCCTGGCG
ACTTTTCAGC GGGCGTATGC GTCTCCGCAG TACACTGTTC AACTGTTAAA AGCTGTGGCT
CGAACACAGG CAGAGTCTCA GGCGATTCAG GTGCGGCAAT TCACGACCAA TGAGAATGGC
GCCATTGCTG CAGCCGCACG ATTCGCCTCT GAGAAGATGG AGTTGGATCG GCCTGTCGAT
CCTAATGAGC CCCTTGTGGG CACACTTTCG ATGGAAGATG TGGTTGCCGG TTTAGAAAAG
CATAAAGGCG ATGCCAAGCT GGGAGCCCGG CTTTTCAAAC GACAGGGATG TGTGGCCTGC
CATTCGGTTT CGAGTAAGGA GACGATCAAG GGCCCGCTCC TCGCGGGAAT CACAGCACGT
TACAACCGGG CGGAGCTTAC GGAATCGATC ATTCTGCCCA GTAAGAAGAT TGCTCAAGGG
TTTGAGACGC AGTCATTCCT GCTGACAGAT GGTCGAACCT TGAGTGGTTT TGTCACGAGA
GAAGGTGGCG ATGATCTCGA ACTCCGCAGC ATCACCGGGG TGCCGACTGT CGTTCAAAAA
GCAGATATCG ATGAGCGAAC TCGGTTGGAA CTCTCGATGA TGCCAGTCGA TCTGGTGAGT
AAGCTGACGG TGAAAGACCT GGCTTCGCTG ATGGCCTATC TGGAATCGAT CAAACAGTAA
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| Protein sequence | MNNVMRKTFC WALSILIVAM ALDANQYQTS RGCALAEEIP PTTAPKAAKT LKALLVTGGC
CHDYQRQKKI LTEGISARAN VQWEIVHQGG SSTNAKIPLY ENPDWAKGFD VVVHNECFAD
IPDASWTQKI LAPHKAGLPA VVIHCAMHCY RDKTDEWFKF LGVTSHGHGA HYAFEVVNAV
PEHPIMKGFG NKWMTPKGEL YNIAKIGETT TPLAYGKSSA KKDECVIWVN EYGDKKTRVF
GTTVGHYAEE MQDPVFLNYV TRGLLWSADK LNDDYLISQA SPRVIKVPEN LALGKTATAS
GSQAERDPKF AVDGDEETRW CAPNGGSDYT WQVDLGEPKS IAGIRIVWES PEGGYKFRVE
TSVDGKVWAP LIDQSQKAVL GSDASYQVTE DQVRHVRLVY LGSTHGGWGS FWEFEVHSGK
MIEQTVDAVI DLKPKAVSGD PLLSGVKVPP SFEATIFAAP PEISYPTCLT TSPDGLVFVG
VDLNGSLGAK PQKGKIVRCR DTNGDGKADE FITFCELDSP RGLVWDDGTL YVQHPPFVTA
FHDRDGDGKS EKSEVLVDGI GFDLKFRGAD HTTNGMQMGI DGYLYIAVGD YGFYEAKTKD
GKTLQLHGGG VVRVKPDGTD LEIVSRGQRN IYDVAIDPEM NLLTRDNTND GGGWNVRLSH
VVPFGNYGYP SQFINFPEDR IDCLADFGGG SPCGSVYIDD PALPSPLGRS FYTCDWGRSI
IFRHPLTPAG STFKVEQEPF VHVPRPTDME IDASGKIYIA SWKNGGFDFD KPDVGYVLLL
TPRGTQRSEQ SLDFSKLSMK ELVTLVGHEQ GVTRLAAQRE LLRRPEASQQ VTALKNLALQ
VGSVPRTGRL AAVFTLGQID TIEAVKALEE IYAKEDCQEA VLLALGDSPK ANQGFVVAGL
SSNNPRVVRA ALTAIGRQQW TAAAPQLIPV LANDDAVVAH VAKEVLVSLR PIEVIVNALG
TNDPQVFAGV IDVAKRLHDP RIVNRLLELV SSGTEQQQQL VRTALCRLHF QEAPWDKKWW
GTRPDTTGPY FKPVTWSQSD QIRTALEAAL EADSGDTLKH LVKELRRHRV PSPRIVPALL
KLAQSDRNFY SQAILLLAST DDRTSPTLDL LSTAALSESN DWATRSAAIR GLMTRLPDPQ
AAKGLLATFG RTVPSDELPN DQVSLWTEYL QDARHAEIVP LLTERAFDAQ AGEQEVAWSV
LLSLVEASRT PAAVRDQILA TFQRAYASPQ YTVQLLKAVA RTQAESQAIQ VRQFTTNENG
AIAAAARFAS EKMELDRPVD PNEPLVGTLS MEDVVAGLEK HKGDAKLGAR LFKRQGCVAC
HSVSSKETIK GPLLAGITAR YNRAELTESI ILPSKKIAQG FETQSFLLTD GRTLSGFVTR
EGGDDLELRS ITGVPTVVQK ADIDERTRLE LSMMPVDLVS KLTVKDLASL MAYLESIKQ
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