Gene Plim_1903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1903 
Symbol 
ID9138605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2480402 
End bp2481565 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content56% 
IMG OID 
Productphosphonate catabolism associated alcohol dehydrogenase 
Protein accessionYP_003629932 
Protein GI296122154 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCGA CAACATCCAG TTCTTCTCGA GATAGCAGTG GTCGCATGGA ACGATTGCGG 
CTGAGTGAAG CATTTCTCCC CACAGCCTGC ACTGCTGCCG TCTTCTCTGG TGAGACGCAC
CATCTTGAAC TGAATCAGAT ACCGCTTCCC ATGTTGAGTG CCGGGGAAAT TCTGGTAAAG
GTCACGGCGT GCACACTTTG CGGGAGTGAT CTCCATAGCG TAGAAGGTCG TCGCAAAGTT
CCTGTGCCGA CAATTCTGGG GCACGAGATT GTGGGGCAGA TTGCGGCGAT CGGCGGAGAC
TTTACTCCCG CTGATCTCGC CAACGCCCCA CTCCATGTGG GAGATCTCGT GACCTGGGCC
GTCGTGGCCA ACTGCGGCAA ATGCTTCTAT TGCGAACGCG ATCTTCCCCA GAAGTGCCTG
AATTCGGTCA AGTATGGTCA CGAAGCGTTT CGTCCCGGGC GAGAACTTCT GGGAGGGTTG
GCCGAATACT GCCTGCTGGT CCCCGGGACG GCAATTATCA AATTGCCACC CCATTTGCCC
ACATCGGTGG CCTGTCCAGC CAGTTGTGCG ACCTCGACAA TTGCCGCAGT TCTTGAAGCG
GCTCAACCGC TTAAGGGCCG CAGTATTTGC ATTCTGGGAG CCGGGATGCT GGGATTGACG
GCCTGTGCGA TGTCCAGATC GCTGGGCGCC ACCCATGTCA TTTGCGTTGA TCCTCAACCT
TATCGACGAG AGTTAGCCTT GAAGTTCGGT GCAACCCACA CTTCAGATTC GATGCAACTG
GCAGAGACTC TCCGTTCGGC TGGTCTTCTT CATGGGGTTG ATGCCGTTGC TGAACTCTCT
GGGAACAATG CCGCCTTTGA AAGTGTCTGG CCTCTCGTGC GACTGGGCGG CACGATTGTT
CTGGCGGGTT CCGTCTTCCC ATCACCTGCG ATTGGTATGG CACTCGAACA GCTTGTCCGT
CGTCAGATTA CCATGCGGGG TGTCCACAAC TATGGCCCGA GGCATTTGCG AACTGCTATC
GAATTTCTGG CCAGCGAACA CCAGAATTAC CCCTTCGAGT CGCTGGTCAA GCAGTGGTTT
CCTCTGGAAC AAATCAGTGA AGCCATGACG GCAGGTAAAG AACCCTCGGC AATCCGCATC
GGGATCACCA TGACTCAGAA GTAG
 
Protein sequence
MQATTSSSSR DSSGRMERLR LSEAFLPTAC TAAVFSGETH HLELNQIPLP MLSAGEILVK 
VTACTLCGSD LHSVEGRRKV PVPTILGHEI VGQIAAIGGD FTPADLANAP LHVGDLVTWA
VVANCGKCFY CERDLPQKCL NSVKYGHEAF RPGRELLGGL AEYCLLVPGT AIIKLPPHLP
TSVACPASCA TSTIAAVLEA AQPLKGRSIC ILGAGMLGLT ACAMSRSLGA THVICVDPQP
YRRELALKFG ATHTSDSMQL AETLRSAGLL HGVDAVAELS GNNAAFESVW PLVRLGGTIV
LAGSVFPSPA IGMALEQLVR RQITMRGVHN YGPRHLRTAI EFLASEHQNY PFESLVKQWF
PLEQISEAMT AGKEPSAIRI GITMTQK