Gene Plim_1895 details

Gene Information

• Locus tag: Plim_1895
• ID: 9138597
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 2473865
• End bp: 2474581
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 53%
• Product: MIP family channel protein
• Protein accession: YP_003629924
• Protein GI: 296122146

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.144507
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTACAC GAAGCTATGT TGCTGAAGCG ATCGGTACTT TCACCCTCGT ATTTGCCGGA 
GCAGGGGCGA TCGTTGTTAA CGATCTCAGT GGCGGTGTTA TTACCCATCC CGGAATTGCT 
TTAACTTTCG GCCTGGTGGT CATGGCCATG ATTTACGCCC TGGGCGATAT CTCAGGAGCC 
CACCTGAATC CCGCTGTAAC ACTGGGTTTC TGGCTTGCAC GGCGACTGCC AGCACGCCAA 
TTGGCACCTT ATATCGCCAG CCAGATACTG GGTGCTGTCA CTGCAGCCAG CCTGTTACGA 
ATGCTCTTCA TGTACCACCC CACTTTGGGG GCAACGTTGC CGGTCTATTT CTGGTGGCAG 
GCTTTGATTC TCGAAATCAT TCTTACCGCC ATATTAATGT TTGTCATTTT GTGTGTCTCC 
ACGGGGGCTC GCGAAAAAGG TGTGATGGCA GGAGCAGCCA TTGGTGCTGT CGTCGCTTTT 
GCAGCCATGT TCGGCGGCCC GATCTCAGGG GCTTCGATGA ATCCGGCACG CTCATTCGGG 
CCAGCCGTTA TCAGCGGAAA TCTCGCCTCA TTGTGGATCT ACATCCTGGC ACCATGCATC 
GGATCAGCGT TCGCTGTCTT GAGTTTTCAG CAACTCCACC AGGAAATTCC GATACCTGCC 
AATCCACAAG ACGAACTCCA GCTCAATAAC CCTACGACAG ACAGGCTCGA ATCATGA 

 

Protein sequence

MSTRSYVAEA IGTFTLVFAG AGAIVVNDLS GGVITHPGIA LTFGLVVMAM IYALGDISGA 
HLNPAVTLGF WLARRLPARQ LAPYIASQIL GAVTAASLLR MLFMYHPTLG ATLPVYFWWQ 
ALILEIILTA ILMFVILCVS TGAREKGVMA GAAIGAVVAF AAMFGGPISG ASMNPARSFG 
PAVISGNLAS LWIYILAPCI GSAFAVLSFQ QLHQEIPIPA NPQDELQLNN PTTDRLES