Gene Plim_1880 details

Gene Information

• Locus tag: Plim_1880
• ID: 9138582
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 2454383
• End bp: 2456374
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 57%
• Product: PEBP family protein
• Protein accession: YP_003629909
• Protein GI: 296122131

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACGTTC CCATTAGAGC CGGACTATTG ATTCTGGCCA TCGGGTTCAC GACCTCGATC 
GTACAGGCTC ATCCCGGCCA TTCGCATCGT AAAAGGTCAT CACCCGCTGA CAATCAAGCG 
TCAGTCACCT CAGAACGCAT CTGGACGTCC TCGACCGGCG CGTTTCGTGA ACAGGGGTCG 
TTCGTCATGG CGCGCGATGG CCTGGTTCAG ATCCGCCGTG ACGACGACTC ATTGGTTTCA 
ATCCCCATCG CGCTGCTGCG GAGCGATGAT CAAAACTGGA TCGAGCGGGG AATGTCCGAG 
ATTCAGCGTC TCGCTGAGAC GAACGGACTC GTGCGGGCAA ATTCAGAAGG CAATTTGCGA 
CTCGACATAC CCATGCGTCT TCCACAGCCC AATGAAGCGG TTGGATTCTT TCCGCTCGTC 
ACGAACGAGT TCCCGCTTCA ACAGGGTGTT CGCCGAAATG TAGATCTGCC AGCGGAGCTG 
CTCCTTGCAC AATTAGGAAA TCGAAAGCCG GAGAAAATCG TGGCACGCGA GCAGGTTCCT 
GAAATCGCCA AAGCCTTTGA GACGTTCGTG AACCTCAAGG CGATTCAGAC CCGTTGGGAC 
GACCGTTTCT TCTACGTCGA ATCGAATGGA ACGCCGGATC ACCAGATGAT GGTCGGCATC 
ACAGCCTGGC AGCAGCAGGT ACCGCTGCCG CAGAGATACG TCGGCGAGAA TGCCTGGCAA 
ATCCCGTTAC ATCCCATCCC CGCTGAGACC CCTGCCACGG CTAAAAATCG CTTTCTGCGA 
GGAGCGATTG CGGTCGCTGT CAATGGCATT CCCATCTTCA ACCCGCTCAA TAATCGGGGC 
GATGATGCCT ACCTGTTCGG GGAGCTTGAT GAATTCGGCG GTCACTGCGG GCGGGCAGAC 
GATTACCACT ATCACATTGC GCCGGTGCAT CTGGAAAAAA CGAATGGCAA GGGAAAGCCC 
ATTGCCTATG CCCTGGATGG CTACCCGATC TATGGCTACG AGGAGCCGGA CGGCTCACCC 
GTCAAGAATC TCGATGCTCT CAACGGCCAC AAAGATGCCA AAGGAAACTA TCACTATCAC 
GCGACGAAGA AGTACCCGTA TCTCAATGGC GGATTCTACG GGGTTGTGAC CGAACGTGAT 
GGCCAGGTCG ATCCGCAACC ACGGGCGGAA CCGCTCCGTC CGGCGCTCCC CCCCTTACGA 
GATGCGAAAA TCACCGGTTT CCAGAAGACC AAGTCCGGCG GTTACACCTT GACCTATGAC 
GTTCGAGGAT CCAAGGGAAC CATCAGTTAC ACCCTCTCGA ACGATGGATC GGCGAAGTTT 
GTGTTCGTCG ACACGAATGG CAAGACGACT GAGGAAACTT ACTCACCAAG GCAGCGCGGC 
CCGGGAGGCG GAGAGCGACG ACCACCGCCT CAGCCTCGTG ATAATCCACC CCCCCGTGTT 
GGGCAACGCC CGCCGCGCGA CGAAGGACTT CCGCCTCCTC GTAACGTTGA AGGCTCACCA 
GCGAACCAGG CTGCAAGTCC AATCAACGCC CAACTTCCCC AGTTGAAAGT GACCAGTTCC 
TCAATCGACG CGAACGGTTT CATTTCCGTC GAATGCACCT GCGACGGGAA GCGGGAATCG 
CCTGCCGTCG CCTGGAAAGA CGCGCCCGAG GGAACGAAGT CGTTAGCAGT CAGTCTTTGG 
CATACAGCTC CGGATCAGGA GAAATCGTAC TGGGTCGTCT ACAACATCCC CGTGACGACG 
CAGAGCCTCG CTCAAAAGTC GCCCAAAGCA GGAACGGTGG GCGCTAATGA TCGCCGTCGC 
GCCGAATACG ACCCGATGTG CTCGAAAGGC CCCGGCGTCA AGACATACCA CGTTACGGTC 
TACGCTCTCT CGGCCAAGTT GAATCTGCCT CCGGAGAAAG CGTCACGAGC GGAACTGCTC 
GCGGCAATCA AGGACATCAC ACTGGCCACC GGAACGCTCG ACTTCAAATA CGAACGGAAG 
GACGCTCGGT GA 

 

Protein sequence

MHVPIRAGLL ILAIGFTTSI VQAHPGHSHR KRSSPADNQA SVTSERIWTS STGAFREQGS 
FVMARDGLVQ IRRDDDSLVS IPIALLRSDD QNWIERGMSE IQRLAETNGL VRANSEGNLR 
LDIPMRLPQP NEAVGFFPLV TNEFPLQQGV RRNVDLPAEL LLAQLGNRKP EKIVAREQVP 
EIAKAFETFV NLKAIQTRWD DRFFYVESNG TPDHQMMVGI TAWQQQVPLP QRYVGENAWQ 
IPLHPIPAET PATAKNRFLR GAIAVAVNGI PIFNPLNNRG DDAYLFGELD EFGGHCGRAD 
DYHYHIAPVH LEKTNGKGKP IAYALDGYPI YGYEEPDGSP VKNLDALNGH KDAKGNYHYH 
ATKKYPYLNG GFYGVVTERD GQVDPQPRAE PLRPALPPLR DAKITGFQKT KSGGYTLTYD 
VRGSKGTISY TLSNDGSAKF VFVDTNGKTT EETYSPRQRG PGGGERRPPP QPRDNPPPRV 
GQRPPRDEGL PPPRNVEGSP ANQAASPINA QLPQLKVTSS SIDANGFISV ECTCDGKRES 
PAVAWKDAPE GTKSLAVSLW HTAPDQEKSY WVVYNIPVTT QSLAQKSPKA GTVGANDRRR 
AEYDPMCSKG PGVKTYHVTV YALSAKLNLP PEKASRAELL AAIKDITLAT GTLDFKYERK 
DAR