| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1868 |
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| Symbol | |
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| ID | 9138569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 2439605 |
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| End bp | 2441083 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | |
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| Product | Retinal dehydrogenase |
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| Protein accession | YP_003629897 |
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| Protein GI | 296122119 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACCA CCCTGACTCC GCCTCGAAAG TATGCCGCTC CAGCCATTAA ACAGACCAAG
CTCCTCATTG GCGGCGAATG GTGCGATGCT GCCGATGGCC GAACTTTTGC CACTTACAAT
CCTGTGAACG AAGAGAAGAT CGCGGATGTT GCTCTCGCTG TAAAAGTGGA TGTCGATCGC
GCTGTAGCCG CCGCTCGGAA GGCCTTCGAA TCGGGACCGT GGCATACCAT GGATGCCCGT
GATCGCGGCC AACTGATCGG CAAACTGGCA GATCTCATCG AAGCCAACTT TGACGAGTTG
GCCGCTCTCG AAACGCTCGA CAATGGCAAG CCAATTCGCG ATAGCAGGGG TGCTGATCTT
CCGCTGGTGA TTGATTGCCT TCGCTACTAT GCGGGCTGGG CCGACAAGAT TGTGGGCCAG
ACAATTCCTG TTCGAGGTGA ATACTTCACC TACACCCGCC GTGAACCGAC TGGCGTCTGC
GGACAGATCA TTCCGTGGAA CTTTCCCATG CTGATGGTTG CCTGGAAGTG GGGCCCTGCG
CTCGCCGCCG GCTGCACCAT CGTCATGAAA CCTGCCGAGC AAACACCTCT CACATGCCTC
CGCTTGGCTG AACTCGCGAT GGAAGCTGGC TTTCCCCCCG GTGTGATCAA CGTCGTCACT
GGCTTTGGTG AAACGGGGGC CGCCATCGTC AAGCACCCCG ATGTCGACAA GATTGCCTTC
ACCGGGTCCG GCGAAACAGC CCAGCGGATC ATGGTCGACG CCGCTACCAC ACTGAAACGA
ATCACTTTTG AACTGGGCGG CAAGAGCCCG AACATCGTCT TCGCCGACGC GAACCTCGAT
GCCGCTGTCG CCGGAGCGGA GTTCGGCCTC TTCTTCAACC AGGGGCAGTG CTGCTGTGCG
GGCAGCCGGT TGTTCGTGGA AAAATCAATC CACGAGGAGT TCGTCGCTAA GGTTGTTTCC
CGTGCGAAGG CCCGCAAACT GGGAAATCCA CTTGAGATGG AGACCACTCA AGGGCCGCAG
GTCGACCGCG ATCAATTCGA CAAGATCATG AAATATATCG AACTCGGCAA ATCGCAGGGG
GCCACCTGCG TCACCGGCGG CCACCGCGTG GGCGAGAGTG GCTTCTTCGT TGCGCCGACC
GTTTTCGACG ATGTCACCGA CGACATGGCC ATTGCGACCG ATGAAATCTT TGGGCCAGTG
CTCAGCATTC TGCCCTTTGA ATCCATCGAG GAAGTGACTC GTCGCGCCAA TGCCACCACG
TTTGGTCTGG CGGCTGCCGT CTGGACGCGG GATGTCGCCA AAGCGCACCG CATTGCCCAT
AACGTGCGGG CAGGAACCGT CTGGATCAAC TGCTACGATG TTTTTGACGC CGCTGCCCCA
TTCGGCGGCT TCAAAATGAG CGGCATGGGG CGCGAACTCG GCGAAGCGGC CCTCGCCAGC
TACACGGAAC TCAAAACGGT CACCATGTCC CTGAAGTGA
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| Protein sequence | MTTTLTPPRK YAAPAIKQTK LLIGGEWCDA ADGRTFATYN PVNEEKIADV ALAVKVDVDR
AVAAARKAFE SGPWHTMDAR DRGQLIGKLA DLIEANFDEL AALETLDNGK PIRDSRGADL
PLVIDCLRYY AGWADKIVGQ TIPVRGEYFT YTRREPTGVC GQIIPWNFPM LMVAWKWGPA
LAAGCTIVMK PAEQTPLTCL RLAELAMEAG FPPGVINVVT GFGETGAAIV KHPDVDKIAF
TGSGETAQRI MVDAATTLKR ITFELGGKSP NIVFADANLD AAVAGAEFGL FFNQGQCCCA
GSRLFVEKSI HEEFVAKVVS RAKARKLGNP LEMETTQGPQ VDRDQFDKIM KYIELGKSQG
ATCVTGGHRV GESGFFVAPT VFDDVTDDMA IATDEIFGPV LSILPFESIE EVTRRANATT
FGLAAAVWTR DVAKAHRIAH NVRAGTVWIN CYDVFDAAAP FGGFKMSGMG RELGEAALAS
YTELKTVTMS LK
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