Gene Plim_1867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1867 
Symbol 
ID9138568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2438200 
End bp2439381 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629896 
Protein GI296122118 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.957951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTGCTCG TCATGTCGTC CACTTGCTCT GAAGCCGAAA AGAGTCTTGA AGAGGGGCCG 
GTTTGTATCC GACGACTCCA TCCTTTGGAT GTATCACAGT TTGACCTGAT GAAGTGGCGA
ACACTTTTCA GTGAATCCAT CGAACCCAAT GTATTTCTCG ATCCCGAGTT TGTGATTCCT
CTGATCGAGG AAGTTCCTAC CGGTTTATGT CCCATACTAT TGATTGCAGA AGATTTGAGG
ACAGGCAGAT GGTTGGGGCT CTGTCTGTTT GAAGTCGCCT GCTGGAGTCT GTTGAGTCCT
TTACCGATGG CGAGAGGATT AGCTTCGCCA TACGCCTTTC AGCAGGGGTG GTTAGTTTCC
CGTGAAAGCG AAAAACGGGC CATCGATGCG CTGTTGGACT ATCAGTTACA GCAACGAGAG
TGGCATGGAT TTCAGATCAA GAATCTCCCT GTGAAATCGA TGCAGACTCA ACTCATGATT
GAAGCCGCTG AGAGGCTGGG AATCTCTGTG ACAACGACTG GAGAATGGCA ACGAGCAGAG
TATGTGACGG GCAGAAACCA GACGACCGAA GATCTGCTGC AGGCGTGTTC GAAGAGTCGA
CGGAAGTCGT TGAAACGCTG TCGGCGTGCT TTAGAAGAAT TGGGAGAAGT TCAGTATCGG
CTCGAACCCG TGCAAAGCAG TCGTGATCCT CAGGTCAATG ACTTTCTGCG TCTGGAAAAA
TCGGGTTGGA AGCTGCTGTC TGGCACTGCC ATTGGATTGA AAAGTGCGGA CGAAGCTTTT
TTTCGAAGAA TGATCGATGG GCTGGCACGC GAAAAACGAG TGCTGTTCGG TGAACTGCAA
TTGAATGGTC AGACCATTGC CAGTACCTGC AATCTGCAAA GCGGTGATAC ACTCGTGGGA
TTCAAAATTG GCTGGGATCC TGCTTACTCG GCTGGAGCGC CGGGGTTGTG GTCCGAACTG
GAAATGGCTG CGGCTGTCAG TCAGCGATAT CCGGAAATTA CACGCATCGA TAGTTGTGCA
GTGCGTGGTT CTTATGTGGA ATCAGTCTGG AAAGACAGGC AGGAGTTATT TTCCGGGACG
TTCTCCTGGT CGCGACGAGG AAAAGCTCTG CAGGCGGCGA AAAGTTGTTA TCGCACGGTC
CGCGATCTCT GTCAGTCTTC AGTCAAAAGT CATGATGAGT AA
 
Protein sequence
MLLVMSSTCS EAEKSLEEGP VCIRRLHPLD VSQFDLMKWR TLFSESIEPN VFLDPEFVIP 
LIEEVPTGLC PILLIAEDLR TGRWLGLCLF EVACWSLLSP LPMARGLASP YAFQQGWLVS
RESEKRAIDA LLDYQLQQRE WHGFQIKNLP VKSMQTQLMI EAAERLGISV TTTGEWQRAE
YVTGRNQTTE DLLQACSKSR RKSLKRCRRA LEELGEVQYR LEPVQSSRDP QVNDFLRLEK
SGWKLLSGTA IGLKSADEAF FRRMIDGLAR EKRVLFGELQ LNGQTIASTC NLQSGDTLVG
FKIGWDPAYS AGAPGLWSEL EMAAAVSQRY PEITRIDSCA VRGSYVESVW KDRQELFSGT
FSWSRRGKAL QAAKSCYRTV RDLCQSSVKS HDE