| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1862 |
|---|
| Symbol | |
|---|
| ID | 9138563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 2432538 |
|---|
| End bp | 2433476 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | lipid A biosynthesis acyltransferase |
|---|
| Protein accession | YP_003629891 |
|---|
| Protein GI | 296122113 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCACA GTTGGCGACA TTGGTGCGAG TTTCAGGCCT TTCGCTGCGC CGTCTGCGTC
TGCGAGATGT TGCCTGTCGT GTGGGTCGAT AGCCTGGCGC ACACGTTGGC CTGGCTGCTC
TGCGATGTAC TGCCGGCACG ATGGACTCGA AAAGCTGTGG CGATGGAGAA TATTGGCCGG
GCATTTGGCC AGACCCACAC ATTGAAGCAG CAGGAGGCAA TTCTCCGGCA GATGTGGGTG
CATCTCTTTC GCATGATCCC CGAGATGGTT CAGGGGCCTC GTAAACTGCA TATTCATTCC
TATCGCAGGA TTGTGCGTTA TGCAGAATAT CAGCCCACCG TCGAAGCGAT GTGTTCAGGT
CGACGGGTGA TCTTTGTGGG TGGGCACTTT GGAAACTGGG AGTTAGGAAT CAGCACCTTC
GGGCTTTGGG GATTTCCTTT AGGAGTGATT GCTCGAGCTC TGGATAATCC GTATCTGCAT
GAATGGTTCA AGGAGTATCG TGAGGGGACA GGTCATCGAT TGATGCTCAA AAGAGGCGAC
TTCGACGAAA TGCTTGAGCT TCTTTCGCGT GGCGGGCATC TGGCGCTGCT GGGTGATCAG
GATGCTGGAT CAAGAGGTCT GTTCGTCGAT TTTTTTGGTC ATCCCGCATC GACCTTCAAA
TCGATCGCCC TGTTAGCACT GGAGTACGAT GCACTCCTGA TGGTGGGGTA TTCGACGAGA
TCGAAAGACT CATTTCATCA ACAGCACTGG GTTGAGTTCG AGATGGGCTG TGAAGCCTTG
ATTGATCCTC GCACGATCAC AGCCTCAGAT CCTGTGCGGG CGATTACTGA GGAATACACC
CAGGCTCTGG AGCGGATGAT CCGCCGTTCG CCCGAACAGT ATTTCTGGGT TCATCGCCGT
TGGAAGAGTG AGCCGCGAGT ACGTCGCAAA GCCGCCTGA
|
|---|
| Protein sequence | MRHSWRHWCE FQAFRCAVCV CEMLPVVWVD SLAHTLAWLL CDVLPARWTR KAVAMENIGR
AFGQTHTLKQ QEAILRQMWV HLFRMIPEMV QGPRKLHIHS YRRIVRYAEY QPTVEAMCSG
RRVIFVGGHF GNWELGISTF GLWGFPLGVI ARALDNPYLH EWFKEYREGT GHRLMLKRGD
FDEMLELLSR GGHLALLGDQ DAGSRGLFVD FFGHPASTFK SIALLALEYD ALLMVGYSTR
SKDSFHQQHW VEFEMGCEAL IDPRTITASD PVRAITEEYT QALERMIRRS PEQYFWVHRR
WKSEPRVRRK AA
|
|---|
| |