Gene Plim_1838 details

Gene Information

• Locus tag: Plim_1838
• ID: 9138539
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 2403677
• End bp: 2405755
• Gene Length: 2079 bp
• Protein Length: 692 aa
• Translation table: 11
• GC content: 53%
• Product: DNA mismatch repair protein MutL
• Protein accession: YP_003629867
• Protein GI: 296122089

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0019765
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTCGGA TACAACAGCT CTCCAACAGT GTAGTGAACA AAATCGCAGC AGGCGAAGTG 
ATCGAGCGCC CTGCCAGCGT GGTGAAAGAA CTGATCGAAA ACAGCATCGA TTCCGGCGCA 
CTTCGGGTTG AAGTCGATAT TGGCGCGGGT GGCAGTGAAT ATATTCGCGT GACCGATGAT 
GGCGGAGGCA TTCACGCGGA TGACATTCTC CTCGCTGTGA CCACACATGC GACCAGCAAG 
ATCCGCACGG CTGACGACCT GTTTCAGATT TCCACACTCG GTTTTCGTGG CGAGGCCCTG 
GCGTCGATTG CCGAAGTGAG TCAACTGAGA ATCCGGTCGC GAATTCCAGA CAGCGATGTG 
GGTTCAGAGC TGGTCGTCAA TCTGGGTGAG CGGGGAGAAG TCGTTCCTTG CGGCTGTGCG 
ACGGGAACAT GTATCGAGAT TCGACAACTC TTTGCAAATA CACCTGTCCG CAGAAAATTT 
CTCAAGAGCG ATGCCACCGA ATTCGGACAC ATCAGTGAAC AATTTACCCG GATTGCACTG 
GCCCGCTCTC ATGTGCACAT GGTGCTTCGT CACAACGATA AAATTGTGTA CGAACTCCCT 
GCCACAGACC GACTGATTGA CCGTCTCGAA ATGTTCTATG GTTCGGCCAT TTCCGAACAG 
TTGATCTCGA TTGATCATCA ACTCGGAGAA ATGCGACTCT GGGGTTATGT CGGCCATCCG 
GCTGTCAATA AAGCCACACG GAAATGGCAG CATCTTTTCT TGAATGGCCG CTGGTTCCAG 
GATCGATCCA TTCAACATGC TCTTTCCGAG GCTTATCGCG GCTTGATCAT GGTGCAGCGT 
CATCCGATCT GTTTTCTCTT TCTCGAACTC AACCCGGCTG ATGTCGATGT GAATGTGCAT 
CCCACCAAGG TGGAAGTACG CTTTCAAGAT CCGCAGTCAA TCTATCGCCT CATGCTCTCA 
TCACTACGCA ATCGATTTCT AGGCATGGAT CTCGACAGCA AGCTCAAGGT TCCTGCTGAA 
GCCAGCACAG TCGATCCTCA AGAGCAGAAC GAAATCCAGA AAGAGTTCTC CCAATGGGCA 
AAGACCGAAC TTTTCAAAAC GGCTGAGATC GCCGGGTCTC CGCTCATGGT TGGATCGACG 
ATCGGCAGTG CCAACGCAAA TAGTCCACTC TCGCTGCTTT CGCCGAACCT GCCGGATTCA 
GCCACTTCTC CCTGGAGCTC GGAAATCGCT CCCGGATTGA ATCGCTTCGA GACTGAGAAT 
CTGGAATGGT CGGCCACGAC TCACCGGACA GTCAGCAGAG TGAATTCACC ATCGCATTTT 
GATCACGTAG CCCATTCCGA ATCGACGGAT GGCATGGATA CGCCAGAAGT CGAAGAGGCG 
GCATTCGCAG AGCAGCCCCA GAAATCTGAT CATGAACTGG ACTCCTCTCA GGCGAGGGAA 
ATCTCTGAAC TTCCTCATGC CGCTGGGAGC CAGAACCATC ATTTCTCGAC ACAATTCCTG 
GAAGGGGTGC GAGCGCTGCA GATTCATGAC TGCTATCTGG TGGTCGAAAC TCCCGAAGGG 
ATGACGGTCA TCGATCAACA TGCCTTGCAT GAACGAATTC TTTACGAAGA ATTCCGCCGT 
CGAGTGCATA GCAAGGCCAT GGAATCGCAG CGACTGCTCA TCCCGGTACC GATTGCCCTG 
GGCTTTCGGG GATCCAGCCT GCTCCTCGAT TGCCGGGAAG CGTTAGATCA ACTGGGATTC 
GAGATTTGCG AATTCGGGCA GGGAACCATT CTCCTTTCGG CCTACCCGGC GATGCTCGGA 
AAACTGAATC AGGAGCAATT GCTTCGTGAT CTGGCGGAAC AATTGGAGTC TTCATCACTG 
GAAAGTGCTC ATCGCGATAT TCTGGATGAG CTACTGAATA TGATGGCTTG TAAGGCGGCT 
GTAAAATCGG GGCAGAAGTT GAGCCAGGAG GAAATCGAAG AGCTGTTGCG ACAACGACAT 
CTTGTCGCCG ATGCTCATCA TTGTCCTCAT GGCCGGCCTA CGGCACTCAA TCTGTCAAGA 
AGCGAACTTG ATCGGCAATT TGGACGTCTG GGTTCCTGA 

 

Protein sequence

MGRIQQLSNS VVNKIAAGEV IERPASVVKE LIENSIDSGA LRVEVDIGAG GSEYIRVTDD 
GGGIHADDIL LAVTTHATSK IRTADDLFQI STLGFRGEAL ASIAEVSQLR IRSRIPDSDV 
GSELVVNLGE RGEVVPCGCA TGTCIEIRQL FANTPVRRKF LKSDATEFGH ISEQFTRIAL 
ARSHVHMVLR HNDKIVYELP ATDRLIDRLE MFYGSAISEQ LISIDHQLGE MRLWGYVGHP 
AVNKATRKWQ HLFLNGRWFQ DRSIQHALSE AYRGLIMVQR HPICFLFLEL NPADVDVNVH 
PTKVEVRFQD PQSIYRLMLS SLRNRFLGMD LDSKLKVPAE ASTVDPQEQN EIQKEFSQWA 
KTELFKTAEI AGSPLMVGST IGSANANSPL SLLSPNLPDS ATSPWSSEIA PGLNRFETEN 
LEWSATTHRT VSRVNSPSHF DHVAHSESTD GMDTPEVEEA AFAEQPQKSD HELDSSQARE 
ISELPHAAGS QNHHFSTQFL EGVRALQIHD CYLVVETPEG MTVIDQHALH ERILYEEFRR 
RVHSKAMESQ RLLIPVPIAL GFRGSSLLLD CREALDQLGF EICEFGQGTI LLSAYPAMLG 
KLNQEQLLRD LAEQLESSSL ESAHRDILDE LLNMMACKAA VKSGQKLSQE EIEELLRQRH 
LVADAHHCPH GRPTALNLSR SELDRQFGRL GS