Gene Plim_1806 details

Gene Information

• Locus tag: Plim_1806
• ID: 9138507
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 2348632
• End bp: 2350689
• Gene Length: 2058 bp
• Protein Length: 685 aa
• Translation table: 11
• GC content: 52%
• Product: hypothetical protein
• Protein accession: YP_003629835
• Protein GI: 296122057

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTCCA TAACGGACGA TCAAACAGAA AACGTCTCTT CATTGTTCGC CGCCCAAAAA 
GCGTCTCTCG CGAAAAAAGC CTCTGCATGG GGTAGAAATC GGATCTTTAT GCCCGCACGT 
TATTCGCGAA TCGTGGCTCT GGCTGTCTGG GTTCTGGCCA TACTGGTCAA CTTTTGGCCG 
TCACTGATTC TCGAGGGGCA GGAACCACCA GCAGGTCAGC CACAAACTTC CGCGGAACTG 
GCAACATCCC AGGATGCGTT GGCTGCCCGG TATCAGCGTT TTGAAAATAC GCTGCAGCAG 
TTGGCAGAAT ATTTGCGAAA GACCGATCCG GCCCGGGCTG ATTTGATTGT GCGGGCCATT 
GGGAAGAGTA AAGAAACCCG CGTTCCTGAC CAAATGGAAG CCCTCGTCGA ACTGTTGAAA 
CAGGAGCGGC TGGGTGATGC CATTTCTCGA CAGCAGGATC TCTCTGTGCA AATGGCTGCA 
CTTTTAGAAC TGCTTCAAAG CGAAGACCGC CGCGACGAAA TCGAACGCGA ACGGGCACGC 
GTGCAGGACC TGATCAAAGA CGTCAATAAG CTCATCGGCC AGCAACAGGA TACTCGTTCT 
GCAACCGAAC GAGGCGGCCC TCTGGGCGAC ATCGAAAAGC GACAATCCAA AATCGCCGAA 
GATGCCCGCA AACTGACTCA AAAAATCGAT CAGCAGGATG CAGCCAAGCG ATCATCGAGC 
CCATCGCAGA GAAAAGGCGA CTCTTCCGAA AGCAGTGAAA AACCGTCGGA TGGGAGTGAA 
TCCAAAGATG GCGATCCCTC CAAGCCTGAT TCTGGTGATT CGGAATCCAA GGATCCGATG 
AACAGCTCTG ACGAAAAGAA GGGCTCAGAG GGTAAGGAAG GCCAATCTTC CGGGAAGAAT 
GGCAAAGAAA AATCACCAGA TTCGAAAACG CCACCGGAAG GCAAAAATGG CAAACCTTCG 
GAAAGCGAAG GTCAAGATCC CAAAGACCCT GCTTCTGAAA AGAAGCCGGG GGATTCTCCA 
GGCGATCCAT CAAATGGAAA GCCGTCCGAG GGGAAACCAT CCGAAGGAAA ACCGTCTGAG 
GGAAAGCCTT CCCAAGGTAA GCCCTCTCAG GGTAAGCCAT CTCAAGGCAA GCCCTCCCAA 
GGAAAACCAT CGGAAGGCCA GCCCTCTGAA AGTCAGCCTT CGGAATCAGG GGATTCAGGT 
CAGTCTTCTC CGTCAAAAGA TGAGAATGGC AAACAGCCTG AGAAAACACC CGGCCGTGAC 
GAAGTCGAGC AATCAATTCG GGCCATGGAT AAAGCGATCG AAGAGCTCCG CAAAAAAAAT 
GCTGGCGGCG CTTCGGATCA ACAGGACAAG GCACTGACCG ATCTGATCAA AGCCCGCGAA 
AAACTCGAAG AGATCTTGCG ACAACTGCGT GAAGAAGAGC GCGAGCTCAT GCTGGCGGCC 
CTCGAATCCC GCTTCCGGGA AATGCTGGCC CGGGAAATCG CCATTTACAA CAGCACCATG 
GGGTTAGCTT CTGTTCCTGA AAAACAGAGA ACCGATCGTC ATCGTTCACG GGCTCTTGAA 
CTCTCTCGAC AGCAGAATGA ACTGGTGCTC GAAGCGTCCA AGGCCTTGAC GCTCCTCCGC 
GAAGAAGGCT CTTCAATTGC CTTCCCGGAA ACCGTCGAGC AAATTCAAGC GGATATGAAG 
ACCATTTCTC AGCGACTCGA AAGAGCTGAT GTCGCCACGC TGACGCAGCA GATTGAAAAG 
GACGTGATTG AAGCTCTCGA AGAACTCGTC GATGCCTTAA GGCAGGAAAT GGAAAAAATG 
AAAGACGAGA AACAGCAGCA ACAACAGCAG CAGCAGCAAC AGCAACAACA GAAGGCACTG 
GTCAATCAGC TGGCTGAGTT GAAGCTGCTG CGTTCACTTC AGTACCGCGT GAATCGACGC 
ACGAAACTCA TTGGGCGTCT TGTGGATGGT GAACAAGCCA TCGATAACGA CATGATTGGT 
CAATTGCGAG AACTCGGGCT GCGGCAAGAG CAGGTTCGAA AAGCCACTTA CGATCTTGCC 
ACAGGAAGGA ATGAGTAA 

 

Protein sequence

MNSITDDQTE NVSSLFAAQK ASLAKKASAW GRNRIFMPAR YSRIVALAVW VLAILVNFWP 
SLILEGQEPP AGQPQTSAEL ATSQDALAAR YQRFENTLQQ LAEYLRKTDP ARADLIVRAI 
GKSKETRVPD QMEALVELLK QERLGDAISR QQDLSVQMAA LLELLQSEDR RDEIERERAR 
VQDLIKDVNK LIGQQQDTRS ATERGGPLGD IEKRQSKIAE DARKLTQKID QQDAAKRSSS 
PSQRKGDSSE SSEKPSDGSE SKDGDPSKPD SGDSESKDPM NSSDEKKGSE GKEGQSSGKN 
GKEKSPDSKT PPEGKNGKPS ESEGQDPKDP ASEKKPGDSP GDPSNGKPSE GKPSEGKPSE 
GKPSQGKPSQ GKPSQGKPSQ GKPSEGQPSE SQPSESGDSG QSSPSKDENG KQPEKTPGRD 
EVEQSIRAMD KAIEELRKKN AGGASDQQDK ALTDLIKARE KLEEILRQLR EEERELMLAA 
LESRFREMLA REIAIYNSTM GLASVPEKQR TDRHRSRALE LSRQQNELVL EASKALTLLR 
EEGSSIAFPE TVEQIQADMK TISQRLERAD VATLTQQIEK DVIEALEELV DALRQEMEKM 
KDEKQQQQQQ QQQQQQQKAL VNQLAELKLL RSLQYRVNRR TKLIGRLVDG EQAIDNDMIG 
QLRELGLRQE QVRKATYDLA TGRNE