| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1802 |
|---|
| Symbol | |
|---|
| ID | 9138503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 2339985 |
|---|
| End bp | 2340896 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF58 |
|---|
| Protein accession | YP_003629831 |
|---|
| Protein GI | 296122053 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCCAAG ACTTCAGAAG ATTTTTGCCG CCTGAGGCCG TGGCAAGGGT CTCTCGTCTG
GAGATTCTCG CGAGGAATGT CGTCGAAGGA TTTCTGAACG GGATGCACCG CAGTCCGTAC
TTTGGTCAAT CTGTTGAGTT CGCACAGCAC CGGGAATATG TTTCAGGGGA TGATCTGAGA
CGTATTGACT GGAAGGCCTG GTCAAAGACC GACAAGTATT ACGTCAAGCA GTACGAAGAG
GAAACCAATC TTCGCACGAC GCTGGTCGTT GATCTTTCCG AATCCATGCA ATTTGGGTCG
AAAGGCAAGA CCAAGCACGA ATTTGCGGTG CAGATTGCGG CGGTCCTCTC ATTATTGCTC
CTCAAACAGC ATGATGCCGT GAGTCTGGTG ACGTTTGACG ACTCGATTCG CACTCAGATT
CCCATGAGCA GCAAGAAGAC TCAGCTGCAC GACATTCTCA TGGGGTTATC CAACGAACAA
CCTGCCAAGA AAACAAATCT TTCCGACATT CTGGCCCAGG TGGCAGATCA GGAATCCCGC
AAAGGGCTCA TCATTCTCGT ATCAGATTTG CTGGCAGATC GCGAAGGGCT GAAAAAGGGA
TTACGACTAT TAAGGTTTCG CGGCCACGAT GTGATGTTGT TTCACGTCCT TGATGATGCG
GAACTCGACT TTGAGTTCAG CGGCCCTACG AAATTTGAAG GTTTGGAAGA TTCGGGAGAA
CTGGTCTGTG ATCCCAGGTC ACTCAGGGAA GGTTACCTGG CTGCTATGAA AACTTACCTG
GATGACATCC GTAAGCATTG CGCCAAATTT GTGATTGATT ACCAGATTGT CAGACCCAGT
GAGAATCTGG ATGCTGTTTT ATTGCATTAC ATGAATCACC GCATGGGAAT GCACCAGAGT
CAGCGAAAAT GA
|
|---|
| Protein sequence | MTQDFRRFLP PEAVARVSRL EILARNVVEG FLNGMHRSPY FGQSVEFAQH REYVSGDDLR
RIDWKAWSKT DKYYVKQYEE ETNLRTTLVV DLSESMQFGS KGKTKHEFAV QIAAVLSLLL
LKQHDAVSLV TFDDSIRTQI PMSSKKTQLH DILMGLSNEQ PAKKTNLSDI LAQVADQESR
KGLIILVSDL LADREGLKKG LRLLRFRGHD VMLFHVLDDA ELDFEFSGPT KFEGLEDSGE
LVCDPRSLRE GYLAAMKTYL DDIRKHCAKF VIDYQIVRPS ENLDAVLLHY MNHRMGMHQS
QRK
|
|---|
| |