Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1791 |
Symbol | |
ID | 9138492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 2322880 |
End bp | 2324157 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | NHL repeat containing protein |
Protein accession | YP_003629820 |
Protein GI | 296122042 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.326453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATGA TCTCCGATAG GCAGTCAATG ACGATCGAAA ACGTGCAGAA TTCAAATCGG GCCCAGAGAT CTCATCGCGC TCACCGGCGG TCTCTGCTTT CCGTTCAAAG ACACCGCACT GTCACCATGC GTTCCGTCAT AATGCGCCCC GGCCAAACGA GCTTTGGGCC ATCAAACCTA ATGCGGCTGG CTGCACTCTG TGTGCTCCTG AGTCTCTTTG CCTTCGCCGA ACTCAATGTC GCCCATGCTG GCGAAGTCAA AACAATCTTT GGATCAGGCA AAGATGGATT CAATGGCGAT CAGCAGCCAT TCCTCGAAAC TCACAGCGGC CAGCCGTTTG GACTCGTGAT TGGGCCGGAT GGTGCTTTGT ATTTCTGTGA GTACACAGGT CACATCATTC GCCGCCTCGA TCTGGAAAAG CAGACTGCGA CAACCATTGC CGGGACTCCT GGCAAAAAAG GATTTGCCGG TGACGGCGGC CCGGCGACAA AAGCCTTGAT GAACGAACCC CATGAACTCC GTTTTACTCC TGCCGGGGAT ATCGTCATTG CCGATATGCG CACGCATACC ATCCGCAAGA TTGATGGCAA AACGGGCATG ATTTCCACAC TGGCAGGCAC AGGAACCGCC GGATTCAGTG GTGATGGCGG GCCAGCCGAA AAAGCTCAAT TGAATATGCC ACATTCCATT CAGATCGATC CGGCTGGCGA TCTGTTGATC TGCGATACCG GGAACCACCG GGTTCGCAAA GTCGATATGA AAACGGGCCT GATCTCGACC GCTTACGGAA CTGGCGAAAG GAAACCTGCC AAAGATGGTG ATCCGCAGGT GGGCACACCC CTCAATGGCC CGCGCAGTAT CGACTTCACT CCCGAAGGAG ACATGATTCT CGCGCTTCGC GAAGGGAACG CGGTCTATCG CTTTCCCAAA GGAGAAGCCA AACTCATCCA CATTGCTGGT GTGGGTGGTA AGCCATCTTT AGTCGGTGAC GGGATTGATG CCCGCAAAGC CATTCTCGGT GCCCCCAAGG GAGCGGCTGT CGATGCTAAT GGCGACATTT ATCTCGCCGA TACCGAAACA CACACGATTC GTGTGATTCG AGCGAAGACC GGCCTGATTG AAACTGTGAT CGGTGATGGC AAAGCCGGTG ATGGCCCGGA CGGGGAGGCA AAGACCTGCC GCCTCAACCG GCCCCATGGC GTATTCATTA CCAAGGAGGG CTTACTCCTG GTCGGAGACA GTTCCAACAA TAAAGTCCGC GTTCTTCCGT TACGATAA
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Protein sequence | MAMISDRQSM TIENVQNSNR AQRSHRAHRR SLLSVQRHRT VTMRSVIMRP GQTSFGPSNL MRLAALCVLL SLFAFAELNV AHAGEVKTIF GSGKDGFNGD QQPFLETHSG QPFGLVIGPD GALYFCEYTG HIIRRLDLEK QTATTIAGTP GKKGFAGDGG PATKALMNEP HELRFTPAGD IVIADMRTHT IRKIDGKTGM ISTLAGTGTA GFSGDGGPAE KAQLNMPHSI QIDPAGDLLI CDTGNHRVRK VDMKTGLIST AYGTGERKPA KDGDPQVGTP LNGPRSIDFT PEGDMILALR EGNAVYRFPK GEAKLIHIAG VGGKPSLVGD GIDARKAILG APKGAAVDAN GDIYLADTET HTIRVIRAKT GLIETVIGDG KAGDGPDGEA KTCRLNRPHG VFITKEGLLL VGDSSNNKVR VLPLR
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