| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1780 |
|---|
| Symbol | |
|---|
| ID | 9138481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 2305103 |
|---|
| End bp | 2306194 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003629809 |
|---|
| Protein GI | 296122031 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCATT CTGAAACACT CCAAAGTCGA GCGGATACGC TGCAAGCGTT CGCCCTGAAT
CATGGTGTCA GCCCTGAAGC ATATCTGGCC TGGAAAGAAG TCGCTCAATT ACGCGAGGAG
ATCGGCGATC ATGACGGGTT GTTATACGCT AAAATCCGCT GGGGAATGAC ATGTAGCTTT
AGCGGGCATG GCGCGGAGTC ATTGCCTCTA CTTGCCTGGT GCCTGTCTCA GTGTGAAACC
GACGCAAAAA TGATGCAGCG ATACCGCAGC CATCTCCTCA CGTTTTTTCG CAATGTGGCT
GGAGGTGTTG CGGATTACGA TACTTTATCG CTCCACCAGA TCGAACAACT GATCAAACGC
CTGCAGCAGC ATATGACGTC GGGTCATTCT GGACAACGGG AAATTGCGTT TATACGCTTT
ACACTTGCCA GTCACACGGG TCATATCAAA CGAGCAGAAG AAGCCTATCG GGAATTCATT
GATTCACCAC GAGATTTGTA TTCTCGCTGC CAGGCCTGCG AGACAGATGG AGTCATTCAG
TATTTGCTTT TCAAACAAAA CTGGGAAGAA GCAATCGCAC AAGCTCAACC CGCACTCAAA
GGTCTGGCCA CGTGTGCAGA AGTCCCTCAC AGAACAATTG CGTATGTCCT GCAACCTCAC
GCGCTTCTGG GCCGTTATGA AGAAGCCGAC GCTTTGCAGA AGCGAGGCTA CCGCTTAATC
CGCAACAATC CAAGATTCTT AAGACATCAA GCACTGCATA TTGCCTATCT TCGACATCGA
GGGAGATTCG TTGCTGCACT CAATATGATC GAACGCCATT TCCGAAGTGC AGATGAGACA
CTCATCCCGC TCAGTCAGCT TTACTTCTTC GTCGCCATGC GAAAGGTACT ACAAGAGGTC
GCTTTTCAAA AATCACGCGT CAAACTTTCG CTTGGAGTTG ATTTGCCTGG CCTGCAATCC
GATGGATATC AGGAGATCGC CCCGCTTCTG GGTTGGCTCA ATTCACGTAT CGAATCAAGA
TTTACGTCTT TTGATCGTCG TAACGAAACG AGTTATATCT CCCAATTGAT GCCCAAAGAC
TTTATCTACT GA
|
|---|
| Protein sequence | MSHSETLQSR ADTLQAFALN HGVSPEAYLA WKEVAQLREE IGDHDGLLYA KIRWGMTCSF
SGHGAESLPL LAWCLSQCET DAKMMQRYRS HLLTFFRNVA GGVADYDTLS LHQIEQLIKR
LQQHMTSGHS GQREIAFIRF TLASHTGHIK RAEEAYREFI DSPRDLYSRC QACETDGVIQ
YLLFKQNWEE AIAQAQPALK GLATCAEVPH RTIAYVLQPH ALLGRYEEAD ALQKRGYRLI
RNNPRFLRHQ ALHIAYLRHR GRFVAALNMI ERHFRSADET LIPLSQLYFF VAMRKVLQEV
AFQKSRVKLS LGVDLPGLQS DGYQEIAPLL GWLNSRIESR FTSFDRRNET SYISQLMPKD
FIY
|
|---|
| |