Gene Plim_1746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1746 
Symbol 
ID9138447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2269114 
End bp2270067 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content56% 
IMG OID 
ProductLactate/malate dehydrogenase 
Protein accessionYP_003629775 
Protein GI296121997 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.591048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCGTT TCTCAGCGAA AGTCAGTTCC ATGAAAGTCA GCATCATCGG TGGCGGCGGG 
CTGGTCGGGT CATGTGCCGG GTTTGCACTG CAACTCGGAA AGATCGTTCG CGAGATCGTC
ATGATCGACG TGAACCCTGA AGCCGCCGAT GGTCATGCAC TGGATATTCT GCATGGTGCC
AGCCTGGTGG CTGATCAGTC GATTCATGCG GGTACAATGG CTGATTGTGC CAATAGCGAT
GTCATCGTCG TCACCGCCGG CCTGCGGCGT AAGCCCGATG AGAGCCGCCT GGATCTGATC
AACCGGAACG TGGCACTTTT CCGCGGAATT CTGGGAGATA TCAAGAAAGC GGGCCCGAAG
TCAGACGCCA TTCTGTTTGT GGTCTCCAAC CCCGTCGACG TACTGACTTA CCTGGCCATT
CGAGAACTGG GTTTGCCACC GAAGCAAGTC ATCGGATTAG GAACCGTACT CGATACGACA
CGCCTGCGCA GCTTGCTGGC ACAGCAGCTT TCCGTCCCGC CAACTCAAGT CGATGTCACC
ATTTATGGTG AGCATGGCGA TAGCATGGTG CCGATCTGGT CACTGGGCCA GATTGGCGGC
CTGCCCGTCG ACAAGTACCC AGGCGTTACG CCGCAACTCA TCACCGAGAT TGAGAAGCGG
GCACGCAACA GCGGTGCGGA AATGCTGAAG AAAAAAGGCG GCGCCGGCTT TGCAGTCGGT
GTATCGATTG CCGATGTGAT TCACAGTATT GCACTTGATC AGCGTCGTGT GATGCCCGTG
TCGTCGTTAC AAAACGGGGC TTACGGTCTG CGTGATGTGG CGATTTCCGT TCCAACGATT
GTGGGACGCA AAGGTGTTCT GGGGGTCGTT GAAGTGGATC TCTGGCCTAA GGAAAAGATT
GCTCTGCAAT CGAGCGGCCG CGTTCTGCGA GAGACCATCG AAAAGGTGCT CTAG
 
Protein sequence
MHRFSAKVSS MKVSIIGGGG LVGSCAGFAL QLGKIVREIV MIDVNPEAAD GHALDILHGA 
SLVADQSIHA GTMADCANSD VIVVTAGLRR KPDESRLDLI NRNVALFRGI LGDIKKAGPK
SDAILFVVSN PVDVLTYLAI RELGLPPKQV IGLGTVLDTT RLRSLLAQQL SVPPTQVDVT
IYGEHGDSMV PIWSLGQIGG LPVDKYPGVT PQLITEIEKR ARNSGAEMLK KKGGAGFAVG
VSIADVIHSI ALDQRRVMPV SSLQNGAYGL RDVAISVPTI VGRKGVLGVV EVDLWPKEKI
ALQSSGRVLR ETIEKVL