Gene Plim_1726 details

Gene Information

• Locus tag: Plim_1726
• ID: 9138427
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 2244217
• End bp: 2246349
• Gene Length: 2133 bp
• Protein Length: 710 aa
• Translation table: 11
• GC content: 53%
• Product: hypothetical protein
• Protein accession: YP_003629755
• Protein GI: 296121977

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTTCTC GGAGATCGAT GCTGGGAGTC ACTGCCCTGG GTGTTGCAGG AACTGGTGTG 
TCGGTCATCG GGGGTCTGGC AGGTGGTGTT CAAAGCAGCT CAGGAACTGC GATGGCAAAC 
AACACGCCTC ATGAGCCAGC AACCATCCCA TCGAATTCAG AAAGTGTGAT CCAGAATCTC 
AAAGAACAGG AAAAACTTCC TCCCATCCAG CGATTTGGCC GGATGATGCA CAATTACATC 
GATGGTCAGA TCCGCGAAAA AATGCAGGAA CGCCAATCGA AACTCTCTCA GATCAATACC 
CGCGAAGCGG CTCTTTCTTA CATTCAGGAT GTCAGTCAGA AGATCAGAAC AGCCTTTGGC 
AGTTTTCCAG AACGCACTCC GCTCAATGCG CGGATCACTG GAACTCTCAA TAGAGATACG 
TATCGCGTTG ACAAACTGTT GTATGAAAGT CAGCCCGGTT TTTTTGTGAC GGCGAATCTT 
TACGTGCCAA CGGCCACAAA AGGCCCCTTC CCGGCTGTCG TGGGGGAATG TGGCCATGCC 
GTAAATGGCA AGGCCTATCC TTCATACCAG TCGTTTGCGC AAGGTTTGGC CAGGCAAGGT 
TACATTGTGT TGATCTTTGA CCCGGTGAGT CAGGGAGAAA GAATCCAGTA TCCTGCGGAT 
GATGCAGCGA AGTCCCGGAT CGGGATCGGC GTGCTGGAAC ACCTTCATGA AGGGAATCAG 
CAGTTCCTGA TCAATGAGTT TCTGGGGACG ACCCGTGCCT GGGATGCAAT TCGTGCGTTG 
GATTATCTCC AGTCGCGCGA GGATGTGATT CCTCATCAGA TCGGGATTAC AGGAAGTTCC 
GGCGGTGGCA CCTTGACCAT GTGGCTGTGT GGTCTCGATT CCCGGTGGGG AATGGCGGCC 
CCCAGTTGTG CGGTGACTTC TTTCTATCGA AACTTTCAGA ATGAACTCCC CACGGATACG 
GAACAGTGTC CGCCTGAAGC TTTGCAGTTC GGTCTGGATC ATGCCGACTT TGTGGCGGTC 
ATGGCTCCGA AGCCGGTCGT CATTCTTGCC CAGGAGGAAG ACTTCTTTGA TGTGCGTGGG 
ACCATTCAGG CTTATGAAGA GCTTCGCAAA ATCTGGCGTT TGCTGGGTCA TGAAGACAAC 
TTGAAACTCT CGATTGCACC GGGTGGGCAT GACTATTCTC GCGTGAGCCG GGAAGCGATG 
TATGCCCATT TCCATCAGGC CACCGGTCAA TCCAAAGCCA GTACCGAACC TCAGATCCTA 
CTGGAAAAAG ATGCCGATCT GTTCGTGACC ACTCAAGGCC AGGTGGCGGA ACTCAAAGGA 
GCGACGGTCT TCAGTATGAC GGCTCAGAAA GCTCGATTGA TCGCACAGGC TCGCCCTCGA 
AAGGTCGGCG AGGATTGGAA AAAGCATCTT CGAGCATGCC TTCAGCTTCC TGAAAAATTC 
TCCGTACCCG ACTACCGCAT TCTTCGAAGT GTCTCAGGGC GCAAGTATCC ACGCCCCGGT 
GTGACTCATT ATGCACTTCA GACAGAGCCT GGAATTGAAA CGATTGTCTA TCGCCTCGCC 
CAGCAGCGAT TGGAATCAAG GCCACCCGTT CTGAAGGAAG GTTGCTCACT TTATGTGTCG 
GATCTCTCTA CCGACAGCGA ACTTCGTGAA GAAGCGTGGT TGCGCCGGCG GATAGAATCA 
AATCCCGATC AACCCTTCTT CGCCTGCGAC CTGCGTGGCG TTGGTGATTC CCGCCCCGAC 
ACCTGTGGTG GCACACAAAC TTATCTTCAG CCTTACGGCA ACGACTACTT TTATGCGATT 
CATTCACTCA TGTTGGGGCG CTCGATTCCA TGCCAGCGAG TCTTCGATCT GCTTTCGACA 
ATTGCCTGGC TCAAGTCTTT AGGGCATTCA TCGATTGAAT TGGTCGCCTT GGATCGTGGA 
ACAATCCCGG CACTCCTCGC TGCCTGCCTG TCCGCAGAGA TTGCCAGTGT GCAGTTTGTG 
GGATTGCCCG ACAGTTATCT GGCAATGGCG AACACAGAGG ATTATCAGTG GCCGCTATCT 
TCCATGATTC CCGATGTCCT CTCAAAGTTT GATTTGCCGG ATGCTGTCGA ACAGATCAAG 
TCACGCGGCA TTCGCTGGAT GGATGTGTCT TGA 

 

Protein sequence

MLSRRSMLGV TALGVAGTGV SVIGGLAGGV QSSSGTAMAN NTPHEPATIP SNSESVIQNL 
KEQEKLPPIQ RFGRMMHNYI DGQIREKMQE RQSKLSQINT REAALSYIQD VSQKIRTAFG 
SFPERTPLNA RITGTLNRDT YRVDKLLYES QPGFFVTANL YVPTATKGPF PAVVGECGHA 
VNGKAYPSYQ SFAQGLARQG YIVLIFDPVS QGERIQYPAD DAAKSRIGIG VLEHLHEGNQ 
QFLINEFLGT TRAWDAIRAL DYLQSREDVI PHQIGITGSS GGGTLTMWLC GLDSRWGMAA 
PSCAVTSFYR NFQNELPTDT EQCPPEALQF GLDHADFVAV MAPKPVVILA QEEDFFDVRG 
TIQAYEELRK IWRLLGHEDN LKLSIAPGGH DYSRVSREAM YAHFHQATGQ SKASTEPQIL 
LEKDADLFVT TQGQVAELKG ATVFSMTAQK ARLIAQARPR KVGEDWKKHL RACLQLPEKF 
SVPDYRILRS VSGRKYPRPG VTHYALQTEP GIETIVYRLA QQRLESRPPV LKEGCSLYVS 
DLSTDSELRE EAWLRRRIES NPDQPFFACD LRGVGDSRPD TCGGTQTYLQ PYGNDYFYAI 
HSLMLGRSIP CQRVFDLLST IAWLKSLGHS SIELVALDRG TIPALLAACL SAEIASVQFV 
GLPDSYLAMA NTEDYQWPLS SMIPDVLSKF DLPDAVEQIK SRGIRWMDVS