Gene Plim_1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1707 
Symbol 
ID9138408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2216142 
End bp2217278 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629736 
Protein GI296121958 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCTGC TGGCCTTTAA CGGGTTTGGC ATTCTGGAGG CCAGTCGAAA CTTTCCCGCG 
TCGGAAGGCT GGCAGACCGC GGGCTGGATG TTTGAACATG TCGCCTGGCG AGGATGCTCC
CTCTGGGACA TGGTTCAACC GTCGTTCATG TTTCTCGTCG GTGTTTCGAT CCCTTGGTCA
TTGGCTGCTC AGAAATCAAA AAACGTCTCG ACAGGGCAGG GCTGGGTGCG CGCTGTCTGG
CGATCTGTCC TGCTGGTCGT ATTGGGCATT TTCCTGATCT CAAACAACAA GCCTTCCACT
GATTTTTCGT TTGTGAACGT CCTGACCCAG ATTGGCCTGG GATACCTCGT GGTCTATGCC
GTCGCCCAGT CTTCTCGACC TCTGGCTCCT TTCATGGCGG CAGCGATCCT GGCGGCCTAT
TGGCTGCTTT TTGCACTCTG GCCTGTTGTT AGTCAGGGGC CTATTGGAAG TCAGGAGTTA
GCGGCACAAC TCAACCTCCC CATCGACCGT CAGCAACTGG CAGGTTTTGG TGCCCACTGG
AATCAGCATT TGAATCCTGC GGCCAGCTTC GATCGCTGGT TTCTCAATCT GTTCCCGCGG
GAAACACCCT TCGTCTTCAA TCGTGGCGGA TACCAGACAC TCAACTTTAT TCCCTCCATC
GCGACGATGT TACTTGGCCT GGCGGCTGGT CAGACCATTC GCGAAGTCCC AGGTGCTTTC
CCCGCAGCCA TTCGGCTCGT CCTGGGTGGA GTCGTGATTG CCTTACTTGG CTGGCTGCTG
GATATCACGG GTGTCTGCCC ACTCGTTAAA CGCATCTGGA CACCTTCCTG GACACTCTGG
AGCGGCGGGT TATGCCTGTC GATTCTCGGG CTCTTTCACT TTCTGACAGA AGCCCTTCAA
AAGCAGATTC TCGCCTGGCC ACTCACCATT GCCGGGATGA ACTCCATCGT GCTCTACGTC
TGCTACATGT TGCTCCGACC ATGGACGGCA GCCTCGTGGG AACGCCATTT CGGACCAAAC
ATTTTCCTGA TGGCTGGCCC GGCTCTGGCT CCCATCCTAC AGGCCTGTTT CGTGGGTTTT
TCGTTCTGGC TGTTTGTCTG GTGGTTGCAG AGACAAAAAG TCTTTATCCG TCTCTGA
 
Protein sequence
MILLAFNGFG ILEASRNFPA SEGWQTAGWM FEHVAWRGCS LWDMVQPSFM FLVGVSIPWS 
LAAQKSKNVS TGQGWVRAVW RSVLLVVLGI FLISNNKPST DFSFVNVLTQ IGLGYLVVYA
VAQSSRPLAP FMAAAILAAY WLLFALWPVV SQGPIGSQEL AAQLNLPIDR QQLAGFGAHW
NQHLNPAASF DRWFLNLFPR ETPFVFNRGG YQTLNFIPSI ATMLLGLAAG QTIREVPGAF
PAAIRLVLGG VVIALLGWLL DITGVCPLVK RIWTPSWTLW SGGLCLSILG LFHFLTEALQ
KQILAWPLTI AGMNSIVLYV CYMLLRPWTA ASWERHFGPN IFLMAGPALA PILQACFVGF
SFWLFVWWLQ RQKVFIRL