Gene Plim_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1702 
Symbol 
ID9138403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2211563 
End bp2212717 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content56% 
IMG OID 
Productchorismate synthase 
Protein accessionYP_003629731 
Protein GI296121953 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGAA ACAGTTTTGG ACAAGCATTT CGCATCACGA CCGCTGGCGA GAGCCACGGG 
CCGGGGAACG TTGTGATCGT CGATGGTGTT CCCGCGGGAA TTCCACTGAC GACAGACGAT
CTGCTGATCG ATCTCAATCG CCGCCGCCCC GGGCAAAGCC ACATCACGAC ACAGCGCGAT
GAAGCTGACT TGCCCGAGAT TCTCGCGGGT GTCTTTGAAG GACAGACGAC AGGCACCAGC
ATTGCCATCC TCATTCGCAA CACGGATCAG CGAAGCAAGG ATTACGGCAA CATTCAGGAT
GTCTACCGTC CCGGTCATGC CGATTTCACC CTGGATGCCA AGTATGGATT TCGAGACTAC
CGGGGAGGTG GAAGGTCGAG TGCCCGCGAA ACCACTGCGC GCGTCGCAGC AGGGGCTATT
GCCAAAAAGC TCCTCGCCCA CGCATTGGGA GCCCAGGTGA TTGGCTATGT CCATCAGGTG
GGATCGATTG TCGCTGAAGT GCCTCATCCA GAATCAGTCA CACTGCAGCA GGTTGAGTAT
CTGGCTGATG GAACGCCGAA CATTATCCGT TGCCCTGATG AAGCCACTGG CAGCCGGATG
ATTGCACTCA TTGAAGAAGT GCGTAAGCAA CAGGATTCAA TTGGCGGTGC GGCCACAATT
GTGGCTACTG GAATCCCTGC AGGACTGGGG GAACCTGTCT TCGATAAGCT GAAAGCCGAT
CTCGCAAAAG CTCTCTTCAG TCTCCCTGCG GTTCTGGGTG TGGAGTACGG CATTGGATTC
GGCTGTGCCA CCATGCGCGG GAGTGCCAAC AACGATTACT TTGTCCCCAA AGATTCATTT
GACGCTTCGA CTTCCGCGAT TCCTGCGATT GATAACATCA CCACACAAAC GAATCGTCAT
GGCGGGATGC TGGGGGGCAT TTCGAGTGGT CAGGCCATCA TTCTGCGTGC TGCTGTCAAG
CCCACCAGCA GCCTGCCACT AGAGCAGCCC ACCGTAACGC GGGCCGGTGA GGCCACGACA
ATACGCACCA AAGGGCGGCA TGATCCTTGC CTTCTGCCGA GATTCATCCC CATGGCTGAA
GCGATGGTCG CAATTGTGCT GGCCGATCAT TGGCTCAGGT GGTGCGGGCA GAAAAACTGG
AAGTCTGCCA CTTAG
 
Protein sequence
MAGNSFGQAF RITTAGESHG PGNVVIVDGV PAGIPLTTDD LLIDLNRRRP GQSHITTQRD 
EADLPEILAG VFEGQTTGTS IAILIRNTDQ RSKDYGNIQD VYRPGHADFT LDAKYGFRDY
RGGGRSSARE TTARVAAGAI AKKLLAHALG AQVIGYVHQV GSIVAEVPHP ESVTLQQVEY
LADGTPNIIR CPDEATGSRM IALIEEVRKQ QDSIGGAATI VATGIPAGLG EPVFDKLKAD
LAKALFSLPA VLGVEYGIGF GCATMRGSAN NDYFVPKDSF DASTSAIPAI DNITTQTNRH
GGMLGGISSG QAIILRAAVK PTSSLPLEQP TVTRAGEATT IRTKGRHDPC LLPRFIPMAE
AMVAIVLADH WLRWCGQKNW KSAT