Gene Plim_1697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1697 
Symbol 
ID9138398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2202426 
End bp2202947 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content56% 
IMG OID 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_003629726 
Protein GI296121948 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCGC CAACTCAACA CGAACATTCC CTTTCGAACA AATTGGAAAG CGCAACGGGC 
AAATTGTTCG ATGCCCAGCC ACCAGCCCGG GCCGAACGAG TTCGTCGAAA ATCGAACAAC
ACGGCTCTGA ACAGCGTCGA TCTCGACATC ACACCCATGA TCGATTGTGT CTTTCTGCTG
CTGATCTTCT TTATGGTCTC GTCCACAATG CAGGGAACAC CTGATCTCGA CGTCCCCTTT
GCAATTCACA CGCAAGGCGT CGACAGCCGG CAGTCGACCG TACTGATTCT CAGGCCAGGC
AGAAACCCGG GTGATCGCGC ACTGATTACT CTTGAAGACT CCGGCCAGCC GATCTCTTTT
GCAGAAATTG GTCAACGGGT GACAGACGCT GTGCGAAACG GCCAGCGAAA TGTCGTCGTC
AAGGCCGAGG GGGACGTGGC CCACGGCGAT GTCAGGGATG CCATGCAGGC TGCGGCAAAA
GTCCAGGGCA CCAGCGTGTT TGCCGGTGTA CGGGAGAAGT AG
 
Protein sequence
MNPPTQHEHS LSNKLESATG KLFDAQPPAR AERVRRKSNN TALNSVDLDI TPMIDCVFLL 
LIFFMVSSTM QGTPDLDVPF AIHTQGVDSR QSTVLILRPG RNPGDRALIT LEDSGQPISF
AEIGQRVTDA VRNGQRNVVV KAEGDVAHGD VRDAMQAAAK VQGTSVFAGV REK