| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1682 |
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| Symbol | |
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| ID | 9138383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 2181456 |
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| End bp | 2182319 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003629711 |
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| Protein GI | 296121933 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCCC ACAAACCGTA TTGGCCTATT GGTGTATTTA CATCTGTCGA TGCCGGGTTA
GGTGTCCATC TGGAAGTGGC ACAGGATCTC AAGGTTCCCA CGGTTCAGGT GCATGCCCCT
CATCCGCATA CGCGAACTCG TGAACATGCT CAGGCTTTTC GAGCCAAGTG CGATGCAGCC
GGCATTCAGG TAACTGTTAT CTTCGGTGGC TTTGATGGAG AAAGTTACGC CGATATCCCC
ACCACGGCAC GAACTGTCGG GCTCGTCCCT CTTGAAACGC GTGCCAGTCG CGTCGCAGAA
ATGAAAGAGA TTTCAGACTT CGCCAGTTGG GTCGGTTGCC CGGCTATTGG ATTGCATATT
GGTTTCGTCC CTGAAAGTTC CAGCCCCGAT TACAGCGAAC TGGTTCGCGT CACCCAGGAT
CTGCTCACTC ATGCAGCAAA CCATGGCCAG GCCGTCCATC TGGAAACAGG GCAGGAATCG
GCAGATCACC TGCTGGAATT CATCGAAGAT GTCAACCGCC CTAATCTGGG AATCAATTTC
GACCCGGCCA ATATGATCCT CTACGGGACA GGCAACCCGA TTGAAGCGCT TCGCAAAGTG
GCCCGTTATG TCCGCAGTAT TCATTGTAAA GATGCTCTCT GGGCCCCAGT CAACGAACGT
GGAAAATCAT GGGGCCAGGA AGTCGCATTG GGGACTGGCG ATGTCGGGAT GGAAGCTTAC
CTCACGACAC TCTGGGAGAT CGGCTATCGC GGCCCACTCA CCATCGAACG CGAAATTCCA
CACGATCCGG TTCAACAGAA GAAAGATCTC GCCAGTGCTC TGGAACTCCT GACAGGGCTG
CGGAAGAAAA TTGCCAACTG CTGA
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| Protein sequence | MTSHKPYWPI GVFTSVDAGL GVHLEVAQDL KVPTVQVHAP HPHTRTREHA QAFRAKCDAA
GIQVTVIFGG FDGESYADIP TTARTVGLVP LETRASRVAE MKEISDFASW VGCPAIGLHI
GFVPESSSPD YSELVRVTQD LLTHAANHGQ AVHLETGQES ADHLLEFIED VNRPNLGINF
DPANMILYGT GNPIEALRKV ARYVRSIHCK DALWAPVNER GKSWGQEVAL GTGDVGMEAY
LTTLWEIGYR GPLTIEREIP HDPVQQKKDL ASALELLTGL RKKIANC
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