| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1642 |
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| Symbol | |
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| ID | 9138343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2121397 |
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| End bp | 2122329 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003629673 |
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| Protein GI | 296121895 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.331171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGACTT CAACTCGCAG AGAATGGCTC GGTCAGACAT CAGACTGTCT CGCAGCAATC
GCGGCTGGTG CTGCTTTAGC GGGAACTGCA GCCATCAATA CCAGCGCTGC CTCTGCCCAG
GAATCAACGA GCCCGGCACT GAAGGGGAAC ATTCGCCATT CGCTGGTTCA CTGGTGCTAT
AAAGACTATT GGAAGGACAT TCACGAGTTT TGTCGTCAGG CGAAAAAACT GGGTGCCCAG
AGTGTGGAAC TGGTGGATCC TGTGCACTGG CCTGTTCTCA AAGAACACGG ATTAAGCTGC
GCGATTGCTT CGAGCCATGG TTTTGTCAAA GGGGTCAACG ATCCTGCCAA TCATGAAGAA
TGTCTGACAG TTCTGAGAAA GAAAATTGAT CAAGCGGCGG ACTTTGGCTG CCCCAGTGTG
ATCACATTCA CCGGGATGAG AGCGAACTCG AAGGGAGTCA TCATTCCTGA TGACGTGGGT
ATGGCGAATT GCGTTAAGGC TTACAAGCAG ATCGCCGGTT ATGCCGAAGA GAAACAGGTC
ACGCTTTGCC TCGAGCATCT GAATAGCCGG GTATCGACCC ATCCGATGAA AGGACATCCC
GGATATCAGG GGGATCATGT CGATTACTGC GTCGAGATTC TCAAACAGGT CGGTTCGCCG
CGAGTGAAGC TGTTATTTGA TATTTACCAT GTTCAAATCA TGGATGGTGA TTTGATCTCG
AGGATTCATC AGCACAAAGA TTGGCTGGGC CATATTCACA CGGCCGGTAA TCCAGGTCGC
GGTGAACTGC ATGTGAATCA GGAAGTCAAT TACCCTGCCG TCATGCAGGC CTTGCTGGAT
GTGGGCTACC AGGGCTATGT GGGGCACGAA TTCATTCCCA CCATGGATCC AGCGATTGGA
CTAAAAGAAG CCATTCACCT GTGCGATGTC TGA
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| Protein sequence | MTTSTRREWL GQTSDCLAAI AAGAALAGTA AINTSAASAQ ESTSPALKGN IRHSLVHWCY
KDYWKDIHEF CRQAKKLGAQ SVELVDPVHW PVLKEHGLSC AIASSHGFVK GVNDPANHEE
CLTVLRKKID QAADFGCPSV ITFTGMRANS KGVIIPDDVG MANCVKAYKQ IAGYAEEKQV
TLCLEHLNSR VSTHPMKGHP GYQGDHVDYC VEILKQVGSP RVKLLFDIYH VQIMDGDLIS
RIHQHKDWLG HIHTAGNPGR GELHVNQEVN YPAVMQALLD VGYQGYVGHE FIPTMDPAIG
LKEAIHLCDV
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