| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1628 |
|---|
| Symbol | |
|---|
| ID | 9138329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 2104748 |
|---|
| End bp | 2105674 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003629659 |
|---|
| Protein GI | 296121881 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.107421 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATGG ATCAATCTCT CAATAAAACT CGGGGCTTCT TGGCAATTGC GATGCTGGCC
TGTGGTGTCA TGGCGTTATC GCTCGGGAAT GTCGCTGATG CGCAAGAAGA ACAGCCTGTT
GCCGCCAAAG CTGGCGAAAC GGTGTCACCG ATTCGTGCTC TGCTGATTTC AGGTGGGTGC
TGCCACGATT ATCCAAGGCA GGGAATCATC ATCTCGAAAG GGTTGGCACA GCGGGCGCGG
ATTCAGGTCG ATGTGGTTGA AGAAGGCGAT GGCAAAAAGG ACCATCAAGT ATCGAAATAC
AACGAGGCGA ACTGGGCCGA TGGTTACGAC GTGATCATCC ACAACGAATG CTTCGGCGAC
GTTAAGGACG AAGCCTTTAT TCGCAAGATC TTGAAGGCGC ACATGGAAGG GAAGCCGGCA
ATTTTCATTC ATTGCTCGAT GCACAGTTAT CGCAATGCGG GTGATATTGC CGATGGCTGG
CGGGAACTGA TTGGCGTCAC CTCACGCTGG CACGAAAAGG CACGGCCAAT AAATGTCGTC
AACGCCATGC CCCAGCACCC TGTTATGCAG GGCTTTCCCG AAAAGTGGAT TACGCCGACC
GATGAATTGT ATGTCATTGA AAAGGTTTGG CCGAACTGCA CTCCGCTCGC GACCGCGTTC
GGACCTCAAA CCAAGACCGA GCATCCTGTG ATCTGGTTGA ACACATTGGG AAAAACCAAG
GTGTTTGGCA CCACTTTGGG GCATCCCAAT GAGACGATGC TGAGCGAGGA GTGGTTGGGA
GTCGTCACCC GGGGCGTGCT CTGGACAGTC GACAAACTGC AGGAAAATGG CCAGCCAGTG
CCAGGCTACG AAGGGAGCGG CATCACACCC ATTGAGCTCC CCGGATTAAA GCCAATCCCC
GAAAAGTCTT TGCCAGTCTC ACGTTAA
|
|---|
| Protein sequence | MQMDQSLNKT RGFLAIAMLA CGVMALSLGN VADAQEEQPV AAKAGETVSP IRALLISGGC
CHDYPRQGII ISKGLAQRAR IQVDVVEEGD GKKDHQVSKY NEANWADGYD VIIHNECFGD
VKDEAFIRKI LKAHMEGKPA IFIHCSMHSY RNAGDIADGW RELIGVTSRW HEKARPINVV
NAMPQHPVMQ GFPEKWITPT DELYVIEKVW PNCTPLATAF GPQTKTEHPV IWLNTLGKTK
VFGTTLGHPN ETMLSEEWLG VVTRGVLWTV DKLQENGQPV PGYEGSGITP IELPGLKPIP
EKSLPVSR
|
|---|
| |