Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1621 |
Symbol | |
ID | 9138322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 2096235 |
End bp | 2097422 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003629652 |
Protein GI | 296121874 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATGAAA AGACGATCCT GCTGATTGAT GAAACCACCA ACCGGCACGC TGCACCCGTT TGTCTGAATT CGACATCGGA CGATGCAGGG CCCGCCTGGG GACAGCCCTG GTCAATCAGA TTTGACACAT TGAAAACGGG GGTTTCCGCT GGCGTCGATG TTCTGTCTGT GCAACTCGGG GATGTCTCAT TTGAAATTCT CCCCACTCGG GGCATGGGAT TGTGGAAAGG AACCGTTTCC GGATTTCCTC TCCAGTGGAA TTCACCCGTT TCGAGACCTG TTCACCCCGC GTATGTGGCC CTGCAGGATC GTGGAGGTCT GGGTTGGCTG CATGGATTCA ACGAGCTTTT GTGCCGTTGT GGTATGGGGT TCAACGGGCC TCCCGGCAAC GATGCGGGCA AATCCATCAC CCTGCATGGG CGTTTAGCGA ATCTACCGGC TCATCATCTG CGCGTAGAGA TCTCTGCATC TAAACAGCAG ATTCAGGTGA TTGGAGTGGT GGAAGAGCAG TCGATGTTTG GTGACTGTTT CCGGCTCGAA ACGACGTACA CATTACGCTC GAATCTGGCG GGCATAGAGA TTTGTGATCG GATGACGAAT CTTGGCGGCC ATGAAGCACC GCTTTCCATG CTTTACCACC TGAATATCGG CGAGCCGTTT CTGCAGCAGG GCTCGCAGGT TCATATCCCT TTTCGCACAT TAGCACCACG GGACGCACAG GCTGCGAAAG GAATTTCGAC ATGGCAGACC TACCTGCCTC CCACCCCCGG CTATGCCGAG GAAGCCTATT ACTTTGAACC GATCGCTGAT GAACAAGGTC ATTCGCTCGC TGTGTTGGCT CCTCCAACAG GCAACGTGGG GCCATTGGCT CTGGCGGTCA AATTTGACAA GCAGAGTCTC CCGTGGCTGA CGGTTTGGAA AAACACCTGT GACACAGCGA CGGGGTATGT GACAGGAATT GAGCCGAGTG TGAACTTCCC GAACTTCCAC AGTTTTGAGC GAGAGCAAGG CCGTTTGCCC CTGTTGGCTC CCGGAGCCAG CTATGAGACA CGATTCGGGC TGGAAGTTTA TACGCAGCAG AGAGATGTGG ATGCTGCCCT GTCCCGGGTT CTCGAATTGC AAGCTCTCAC TCCGGGCGTC ATTCATCATT TTCCCAAACC CGGTTGGTCA CCTTCGGCGG AAGTTTGA
|
Protein sequence | MDEKTILLID ETTNRHAAPV CLNSTSDDAG PAWGQPWSIR FDTLKTGVSA GVDVLSVQLG DVSFEILPTR GMGLWKGTVS GFPLQWNSPV SRPVHPAYVA LQDRGGLGWL HGFNELLCRC GMGFNGPPGN DAGKSITLHG RLANLPAHHL RVEISASKQQ IQVIGVVEEQ SMFGDCFRLE TTYTLRSNLA GIEICDRMTN LGGHEAPLSM LYHLNIGEPF LQQGSQVHIP FRTLAPRDAQ AAKGISTWQT YLPPTPGYAE EAYYFEPIAD EQGHSLAVLA PPTGNVGPLA LAVKFDKQSL PWLTVWKNTC DTATGYVTGI EPSVNFPNFH SFEREQGRLP LLAPGASYET RFGLEVYTQQ RDVDAALSRV LELQALTPGV IHHFPKPGWS PSAEV
|
| |