Gene Plim_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1621 
Symbol 
ID9138322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2096235 
End bp2097422 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629652 
Protein GI296121874 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAAA AGACGATCCT GCTGATTGAT GAAACCACCA ACCGGCACGC TGCACCCGTT 
TGTCTGAATT CGACATCGGA CGATGCAGGG CCCGCCTGGG GACAGCCCTG GTCAATCAGA
TTTGACACAT TGAAAACGGG GGTTTCCGCT GGCGTCGATG TTCTGTCTGT GCAACTCGGG
GATGTCTCAT TTGAAATTCT CCCCACTCGG GGCATGGGAT TGTGGAAAGG AACCGTTTCC
GGATTTCCTC TCCAGTGGAA TTCACCCGTT TCGAGACCTG TTCACCCCGC GTATGTGGCC
CTGCAGGATC GTGGAGGTCT GGGTTGGCTG CATGGATTCA ACGAGCTTTT GTGCCGTTGT
GGTATGGGGT TCAACGGGCC TCCCGGCAAC GATGCGGGCA AATCCATCAC CCTGCATGGG
CGTTTAGCGA ATCTACCGGC TCATCATCTG CGCGTAGAGA TCTCTGCATC TAAACAGCAG
ATTCAGGTGA TTGGAGTGGT GGAAGAGCAG TCGATGTTTG GTGACTGTTT CCGGCTCGAA
ACGACGTACA CATTACGCTC GAATCTGGCG GGCATAGAGA TTTGTGATCG GATGACGAAT
CTTGGCGGCC ATGAAGCACC GCTTTCCATG CTTTACCACC TGAATATCGG CGAGCCGTTT
CTGCAGCAGG GCTCGCAGGT TCATATCCCT TTTCGCACAT TAGCACCACG GGACGCACAG
GCTGCGAAAG GAATTTCGAC ATGGCAGACC TACCTGCCTC CCACCCCCGG CTATGCCGAG
GAAGCCTATT ACTTTGAACC GATCGCTGAT GAACAAGGTC ATTCGCTCGC TGTGTTGGCT
CCTCCAACAG GCAACGTGGG GCCATTGGCT CTGGCGGTCA AATTTGACAA GCAGAGTCTC
CCGTGGCTGA CGGTTTGGAA AAACACCTGT GACACAGCGA CGGGGTATGT GACAGGAATT
GAGCCGAGTG TGAACTTCCC GAACTTCCAC AGTTTTGAGC GAGAGCAAGG CCGTTTGCCC
CTGTTGGCTC CCGGAGCCAG CTATGAGACA CGATTCGGGC TGGAAGTTTA TACGCAGCAG
AGAGATGTGG ATGCTGCCCT GTCCCGGGTT CTCGAATTGC AAGCTCTCAC TCCGGGCGTC
ATTCATCATT TTCCCAAACC CGGTTGGTCA CCTTCGGCGG AAGTTTGA
 
Protein sequence
MDEKTILLID ETTNRHAAPV CLNSTSDDAG PAWGQPWSIR FDTLKTGVSA GVDVLSVQLG 
DVSFEILPTR GMGLWKGTVS GFPLQWNSPV SRPVHPAYVA LQDRGGLGWL HGFNELLCRC
GMGFNGPPGN DAGKSITLHG RLANLPAHHL RVEISASKQQ IQVIGVVEEQ SMFGDCFRLE
TTYTLRSNLA GIEICDRMTN LGGHEAPLSM LYHLNIGEPF LQQGSQVHIP FRTLAPRDAQ
AAKGISTWQT YLPPTPGYAE EAYYFEPIAD EQGHSLAVLA PPTGNVGPLA LAVKFDKQSL
PWLTVWKNTC DTATGYVTGI EPSVNFPNFH SFEREQGRLP LLAPGASYET RFGLEVYTQQ
RDVDAALSRV LELQALTPGV IHHFPKPGWS PSAEV