Gene Plim_1619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1619 
Symbol 
ID9138320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2092614 
End bp2093699 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content54% 
IMG OID 
Productprotein of unknown function DUF1559 
Protein accessionYP_003629650 
Protein GI296121872 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.599131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGGA AAAATGGATT TACGTTGATC GAGTTGCTGG TGGTGATTGC CATCATTGCG 
ATTTTGATTG CCCTGCTTTT GCCTGCTGTT CAGCAGGCCC GCGAAGCGGC TCGCCGCACA
CAGTGCCGCA ACAATTTGAA GCAGTTGGGA TTGGCGATTC ACAATTATCA TGACGTGGCT
GGAATGTTCC CGATTGCTGC CTTTATGCCT GAAGGATCAG GGGCCAATCT CAATAAGTCT
TGCTCGTGGT TCGTGCGCGT CTTACCCATG ATGGATCAGG CACCTGCATT CAATCGCATG
GTTTTTTCAG GATCTGACTT TCACGGAACC TCCGGAGCCG ATCGCAGTTG GGAAGTGAAG
AACGGCCTGA TGGTGCCAGG ACTCAATTGT CCTTCCAGCA CTCTGCCGAC CAGTCGTACA
TCAGCGACAA CGGCCAATAC TCGTGCACTC CCGGGAGCTT CTGCGGTCAA CTCCATCACC
GTGCAGATCA CAAACTACGT CGGCATCTGC GGTGCCTACA ACACAGCCGG GGATGCCCGT
ACACAAGCCG CTTGGACAGG CTATGGCCAG ATGGTTGGAA ATGGGATCAT TGTCCCATCG
GTCGATCAGG CATTCTTCAG CAATCCCTTT CCAGGCTACA GCGTTCCTTA CGGTGCGATG
ATTAATCCTG TGACCATTGC TAAGGTTGTC GATGGCACAT CCAACACCGC AATGGTCTCA
GAGCAGGGTA AAGCGATGCG TCAAACGGGC GGCACGACCC CTCTCGATTA CCGTTCATCC
AATCACCGTG GTGGCGCCTG GTCAGCAGGC AACGACCTCT TCTCTCGAAT TGGCGGCTAC
ACATCCCCCC GCTCTCCCGC TCTGATCAAT TGGGATGTTC CGACCTCCAA CATCGTGGGT
GTCAATAATT TTGGACCTTC GGACAGCGGT GGATTGTTGC ACTCGACGTT CAACTCGGAG
CACACGGGCG GTGCCCACTT CCTGATGGCC GATGGTTCTG TGCGATTTAT TTCCCAGAAT
GTCGGAACAG TCGTTGTGGA TGGCATCTGT CGCCGCAACG ACAGCTGGGT TTCAGGCGAG
TTTTAA
 
Protein sequence
MQRKNGFTLI ELLVVIAIIA ILIALLLPAV QQAREAARRT QCRNNLKQLG LAIHNYHDVA 
GMFPIAAFMP EGSGANLNKS CSWFVRVLPM MDQAPAFNRM VFSGSDFHGT SGADRSWEVK
NGLMVPGLNC PSSTLPTSRT SATTANTRAL PGASAVNSIT VQITNYVGIC GAYNTAGDAR
TQAAWTGYGQ MVGNGIIVPS VDQAFFSNPF PGYSVPYGAM INPVTIAKVV DGTSNTAMVS
EQGKAMRQTG GTTPLDYRSS NHRGGAWSAG NDLFSRIGGY TSPRSPALIN WDVPTSNIVG
VNNFGPSDSG GLLHSTFNSE HTGGAHFLMA DGSVRFISQN VGTVVVDGIC RRNDSWVSGE
F