| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1603 |
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| Symbol | |
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| ID | 9138304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2074085 |
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| End bp | 2076607 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | YD repeat protein |
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| Protein accession | YP_003629635 |
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| Protein GI | 296121857 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCGGCCT TCCGCTCGCG GGAGACATTC TCTGCGAGCC ATTCAGATCC CGCCGCGGCC
CAACCCCTCA CTGAGGGGCC GTCAAATGAT ACGGTCCTCG TCTCCGCAGC CGAATACGAC
ATCGCGGGCC GCCCGATTCT CTCGACGCAA CACGTCGATA GCAGCACCAC GCGCGAAACA
ACGTATAGCT ACGATTACCG TGGCCGCCGC CTCGTCACCC AGGGCGAAGA AAACTTCTGC
CAGAAAGAAA CCTACGACTT CCGCGGCCAA CTCATCCGCA GCGAACGCTA CGACGGCTCC
CCCACCGGCA CACTCTTAAG CCGCATCGAA ACCGATTACG ACCCCCTCGG CCGCCCCTAC
CAATCCCGCC GCTACGCCGT CAACCCCACC ACCGGCAGCG TGGGTGCGGC GATGGTCGAT
GAAGTCTGGT ACGATCAAAG TGGAAACGTG CTTCAGCGCA CACCGGCGAA CCTCGCATTA
ACGGAGTCGA TGACCTACGA CGGCTTGGGT CGCGTCCTCA CCATCACTGA TGCAAGAGAC
GCCGTCACAA CGCTGGCTTA CAATATCGCC GGTCATCAAC TCTCGCTGAC TGATGCCGAA
GAAAACACGA CCACCTGGCG CTACGATGGC GTGGGCCGGG TGATTGAAGA AGAAAATTCC
TTGGGGAAAT CGCGATTCTT CGCGTACAAC ACGGCTGGTC ACTTAGAGAC ACGCACCGAT
CGCAATGGAC GAGTCATTCA ACTTGTTCAT GATGATCTCG GGCGACCCGA CACCGAACTC
TGGAAGACCG GCGGCAGCAC TGTGAACACC GTCAGCCGAA CTTACGATGC CGAAGGACGC
TTGCAGTCGA TTTCCGACGA TGTCTCCGCG TATGCCTACA CTTACGACCT TTTCGGCCAC
ATCGCCACGG TCGATAACGA CGGCACCGAC GATGTTCCCC ACGTTCTCTT GACGGCTGAC
TGGAACCGCG CTGGCAATCG CCTCTCGCTG GCGGCACAAG TCGAAAGCAG CGACGATTTC
ACCAACAGCT ACCTCCACAA TGCGTTGGGG CAGCCCACGC AGATCACACA GCAGGGAAGT
GTGGGCGGTA ACTCGGTCAC CGAAAAGCGT GTCGAGTTCG GCTACGACGT ACTGAACCGC
CCCCATGCCA TCAGCCGCTT TGAACAAGTT TCAGGCGGCA CCTCACTGGC CGACAGCGCG
TTCACGTTCG ACGATTATGG CCGGATCGTG CAGTTGAAGC ACGCTCAATC GGCCACCATC
CTGGCCCAGC ACTACTACAC CTACGATGCC GACCGCCGCC TCTCCAGCCA TGAAACTCTG
GATGGTACCT CAGCTTACGA CTACGACGCC ATTGCCCAAC TCACCGCCGC CGATCACCCC
ACGACCCCCG ATGAAGCCTA CAGCTACGAC CTCACCGGCA ACCGCACGAA CACCGGCTAC
ATCACCGGCA CCAACAACCA GCTTCTGGAA GACGGCACCT ACGAATACCT CTACGACGAC
GAAGGCAACC GCATCCGTAA AACGGAAGTC GCCACCGGCG ACTATACGGT CTATTCATGG
GATCACCGCA ACCGGCTGAC CCAAGTCGAA CACCGCGACT CACTCGATAC GCCCCAGAAA
CGAGTGGCCT ACACCTACGA CATCCATAAC CAGCGCATTA CCCGCAAGCT GGACTCGACT
GCCAACAACT CGTGGAACGA CATCCGCCAC TACACGTTCG ACCCCACCAC GAAAGGCACC
ACCAGTGACT GCGTGTTCAT CCACGATGAC AGCGGCGACC TGCTCACCCG ATTCCTCCAC
GGCCCCGGCA TCGACATGCC ATTAGCCGAA GAAGACGACA TTGGCAACAT CAAGTGGCTC
CTCGCCGACC ACCTGGGCAC CATCCGCGAC GTGGCCGAAC ACAACGCGGG TACCACCACC
GTCACCAACC ACCTCACCTA CAGCACCTTC GGCCAAATCA CGGGCAGCAC AGCAGGCCAA
CCCCTCCCGC ATTATACCTT CACGGCGAGA GAATACGACG AAGACACGGG CCTCCACTGG
TACCGCGCCA GATGGTACGA CGCCGAAGTG GGAAGATTCG TAAGCGAAGA TCCGATTGAG
TTTAGCGGAG GCGACACCTC ACTCCTGCGA TATACACGAA ATACCTCTAC CTCGAGAAAA
GACCCTAGCG GATTGAAAGA ACCATATTTT GACTGGACTA TGTACGGAAT ATGGTGCACA
GGGTACGCTG ATCATTACAC ATTAAAGACC GAACCTATTA AACCGCGTGT AAAAGTTCAC
ACACCAACGA CACCCCAGTG TGACCTCAAC AGAATAATCC GCGTTGACCC AAATGCTCCC
GGAAGGCAAA CCTGCTTTCA GCTCCATGAA TTTATTCGCC TAAACGTAGA TCACGGCATG
CTTACAAAAG GCATTCCCAA CAAACAATAC ACTGAACTAC ATTTTCAAGC CCCACTGTTT
GGCAATAACA CTTGGGGCAT TCAAAGCGGA GAAGGAAGAC CCCCCCTACA TCAACTTTGG
TGA
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| Protein sequence | MSAFRSRETF SASHSDPAAA QPLTEGPSND TVLVSAAEYD IAGRPILSTQ HVDSSTTRET
TYSYDYRGRR LVTQGEENFC QKETYDFRGQ LIRSERYDGS PTGTLLSRIE TDYDPLGRPY
QSRRYAVNPT TGSVGAAMVD EVWYDQSGNV LQRTPANLAL TESMTYDGLG RVLTITDARD
AVTTLAYNIA GHQLSLTDAE ENTTTWRYDG VGRVIEEENS LGKSRFFAYN TAGHLETRTD
RNGRVIQLVH DDLGRPDTEL WKTGGSTVNT VSRTYDAEGR LQSISDDVSA YAYTYDLFGH
IATVDNDGTD DVPHVLLTAD WNRAGNRLSL AAQVESSDDF TNSYLHNALG QPTQITQQGS
VGGNSVTEKR VEFGYDVLNR PHAISRFEQV SGGTSLADSA FTFDDYGRIV QLKHAQSATI
LAQHYYTYDA DRRLSSHETL DGTSAYDYDA IAQLTAADHP TTPDEAYSYD LTGNRTNTGY
ITGTNNQLLE DGTYEYLYDD EGNRIRKTEV ATGDYTVYSW DHRNRLTQVE HRDSLDTPQK
RVAYTYDIHN QRITRKLDST ANNSWNDIRH YTFDPTTKGT TSDCVFIHDD SGDLLTRFLH
GPGIDMPLAE EDDIGNIKWL LADHLGTIRD VAEHNAGTTT VTNHLTYSTF GQITGSTAGQ
PLPHYTFTAR EYDEDTGLHW YRARWYDAEV GRFVSEDPIE FSGGDTSLLR YTRNTSTSRK
DPSGLKEPYF DWTMYGIWCT GYADHYTLKT EPIKPRVKVH TPTTPQCDLN RIIRVDPNAP
GRQTCFQLHE FIRLNVDHGM LTKGIPNKQY TELHFQAPLF GNNTWGIQSG EGRPPLHQLW
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