| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1580 |
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| Symbol | |
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| ID | 9138280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2034246 |
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| End bp | 2035766 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | large, multifunctional secreted protein |
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| Protein accession | YP_003629612 |
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| Protein GI | 296121834 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.10938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCGCA CGATCTTCAA CTCGCCTGCA CGAACATGGT TGGCGGGCAA AATGGCTCTG
CTTCTCCTGT TGTGCAGCTT CTTCGTACCT TCGAGCCTTT ATGCAGCCGA AGAGTCCGAA
TACTACCAGT TGGAAGCGAT TCCTCTTCCC AAAGACGTAA CGCTGGAAAT TGGCGCGCTG
GAATTTCTGC CGAATGGCAA GATTGCCGTC TCGACACGCC GGGGAGAAAT CTGGTTTGCG
GATGGCGTCG AAGGTGCCGA CGTCTCCAAG ACCACCTGGA AGCGATTTGC CGAAGGGCTT
CACGAAGTAC TGGGACTGGC CTGGAAAGAC GATGCTCTTT ATGCCACGCA GCGGGGTGAA
CTCAGTCGCT TGCGTGATAC CAACAATGAT GGAGTCGCCG ATCAATTCGA GACTGTCAAC
GATTCATGGC ATATCAACGG CGACTATCAC GAGTATGCCT TCGGTTCCAA GTTCGACAAA
GAAGGAAATA TCTGGGTCGT GCTCTGCTTG ACGGGTTCTT TCAGCAGCGA AGTCAAGTTT
CGCGGCTGGT GCCTGCGGAT CGGCCCCGAT GGTGTCGCCA TTCCCACATG CTCAGGAATT
CGTTCTCCCG GCGGGATTGG TTTTAACGCT CAAGGAGATG TCTTCTACAC CGATAACCAG
GGGCCATGGA ATGGAACCTG TGCGCTCAAG CATCTTCCTC CGGGCAAGTT TGTTGGTCAT
CCCGGTGGAA ACAAATGGTA CGAACAGGCC CCCAACATGG GTGCCAAGCC GCAAGAACCA
CAATCGGGAA GTCGCTTCAT GACAGAAGCT GCCAAAATCC CTGAATACGA GCCCGCTGCG
ATTCTGTTTC CTTACCAAAA AATGGGGCAG TCAGCGTCCG GCATTGCCTG CGATACGACT
CAAGGGAAGT TTGGCCCCTT TAATGAGCAG TTGTTTGTGG GTGATCAGAC GCATTCCACT
GTGATGCGCT GCTTCCTGGA AAAAATCGAC GGCCACTATC AGGGAGCCTG CTTCCCGTTC
CGCGCGGGGA CAGGATCTGG TTCATTGGCC TTACAGTTTG CGCCGCAGGG TGATCTGTTC
GTTGGTGGAA CCAATCGTGG CTGGGGCTCA CGCGGACCGA AGCCTTTTGC GCTGGATCGA
ATCCACTGGA CAGGCAAGAC ACCTTTTGAA ATTCTCAAAA TGGAGGCACA GCCTGATGGT
TTCCTGCTGA CTTTCACTGG GCCGGTCGAT GCCAGTTCTT CCAGCAATCC CGAAAGCTAT
AAGATGACCA GCTACACCTA CATTTATCAG GCATCATATG GCAGCCCCGA AGTTGACCAT
GCCCAGCAGA AGATCGTGCG AGCGGAATTG AATGCTGATC GTACCAAGGT CAAGCTCACC
ATCGAGAATT TACAGCCGGG ATCAGTTCAT GAACTGCATG CAGACGGTGT GAAATCCGAA
TCGGGAGAAA GTCTGCTTCA CAAAGAAGCT TATTACACCT TGAATCGTCT ACCAGGTCAG
TCGGCTGAAG CCGGCAAGTA A
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| Protein sequence | MPRTIFNSPA RTWLAGKMAL LLLLCSFFVP SSLYAAEESE YYQLEAIPLP KDVTLEIGAL
EFLPNGKIAV STRRGEIWFA DGVEGADVSK TTWKRFAEGL HEVLGLAWKD DALYATQRGE
LSRLRDTNND GVADQFETVN DSWHINGDYH EYAFGSKFDK EGNIWVVLCL TGSFSSEVKF
RGWCLRIGPD GVAIPTCSGI RSPGGIGFNA QGDVFYTDNQ GPWNGTCALK HLPPGKFVGH
PGGNKWYEQA PNMGAKPQEP QSGSRFMTEA AKIPEYEPAA ILFPYQKMGQ SASGIACDTT
QGKFGPFNEQ LFVGDQTHST VMRCFLEKID GHYQGACFPF RAGTGSGSLA LQFAPQGDLF
VGGTNRGWGS RGPKPFALDR IHWTGKTPFE ILKMEAQPDG FLLTFTGPVD ASSSSNPESY
KMTSYTYIYQ ASYGSPEVDH AQQKIVRAEL NADRTKVKLT IENLQPGSVH ELHADGVKSE
SGESLLHKEA YYTLNRLPGQ SAEAGK
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