Gene Plim_1577 details

Gene Information

• Locus tag: Plim_1577
• ID: 9138277
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 2031375
• End bp: 2032163
• Gene Length: 789 bp
• Protein Length: 262 aa
• Translation table: 11
• GC content: 54%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003629609
• Protein GI: 296121831

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.839848
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCTGC AAAATCGAGT TGTGTTAATT ACGGGTGGCC GCAGGCTGGG AGCACATCTG 
GCAAAACTGC TAGCCGGACG TGGTTCGCAG ATCGCGATGA CCTGGTATCA GAATGAACAG 
GCGGTCCGTG AAGCTCTCGC AGCCTGTGAA ATAGCCGGTG TTAAGACGTG TTCAATTCAG 
GCTGATCTCC GCCAATTGCA GGATAACCAG CGGGTTGTCG CCCAAGTTGT GGAGCAATTC 
GGGCGCATCG ACATCCTGGT GAATCTGACA AGCATTTACA CGCGTACACC GTTTGCCAGT 
CTGGAACCAT CCGATTTTGA TGACATGCTC GATTCGAACC TGCGAGCTCC GTACTACACC 
GCGACGGAAG TGGCGAAGCA GATGTTGTCG CAACCATTGA TCGAGTCAGC GTCGGGTTAT 
TCGCTACGCG GGAAGATTAT TCATTTTACG GATTGGGCAC TGGATCGACC TTACCGGGAT 
TACCTGCCCT ATCTGGCAGC CAAAGGTGGC CTGGCTGCGT TCACCAAGGC TCTAGCCGTC 
GAACTGGCTC CCTCGATTAC AGTCAATGCG ATTGCTCCGG GGACAGTCTT GCCACCGCCA 
GGACTCTCGG AAGAAAGTCT CGATGCCATC CGGAGAAGTG GAGCTCTTGA ACAAATTGGT 
TCTCCGGCCG ATGTCAACCA TGCGGTACTC TATCTGCTGG AGGGGACCGA TTTTGTCACC 
GGTGAAACTC TGCGAGTCGA TGGAGGCCGC TTTCTGGGGC CTCCTGAGCA AAACTCTGCT 
GATTTCTAA 

 

Protein sequence

MNLQNRVVLI TGGRRLGAHL AKLLAGRGSQ IAMTWYQNEQ AVREALAACE IAGVKTCSIQ 
ADLRQLQDNQ RVVAQVVEQF GRIDILVNLT SIYTRTPFAS LEPSDFDDML DSNLRAPYYT 
ATEVAKQMLS QPLIESASGY SLRGKIIHFT DWALDRPYRD YLPYLAAKGG LAAFTKALAV 
ELAPSITVNA IAPGTVLPPP GLSEESLDAI RRSGALEQIG SPADVNHAVL YLLEGTDFVT 
GETLRVDGGR FLGPPEQNSA DF