Gene Plim_1564 details

Gene Information

• Locus tag: Plim_1564
• ID: 9138264
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 2011895
• End bp: 2015476
• Gene Length: 3582 bp
• Protein Length: 1193 aa
• Translation table: 11
• GC content: 60%
• Product: membrane-bound dehydrogenase domain protein
• Protein accession: YP_003629596
• Protein GI: 296121818

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCATC GTTTCCAGCC GCGATTGTTG TTGAGCCGCA CAGTTCGTTA TGGATTGCTG 
GCTGGCCTGA TGTTCGTTGG AGGATGGGCA ACGCTCGATG CGCAGGTGAT TCCTCATCGG 
CAGGAGAAGC CACCCAACGA TCCCCGCGAC GCAACGACTG CTGCGAAGCT GATGACGGTG 
CCGGAAGGCT TCACGGTGGA AGTCGTCGCC AGTGAGCCGG AGATCGTCAA TCCGGTGGCG 
ATGGCGATTG ACGAGAAAGG CCGCTTCTGG ATCACGGAGT CGCTCGAGTA TCCTCGGCAT 
AGTGCCGGGC CGGGGCGGGA CCGCGTCAAG ATTCTCGAGG ACACCGATGG CGACGGCAGG 
GCCGACAAAT TCACAGTCTT CCTTGACGGG CTGAACATTC CCTCGGCCGT CCAAGTGGGA 
CATGGTGGTG TCTGGATTGC GAATGCTCCG GATCTCCTGT TTGTGCCGGA TGCCAATCGG 
GATGGTGTTC CCGATGGCCC TGCTCAAGTC GTGGTGACCG GCTTTGGCCG CGACGACACG 
CATGAGTTGC CGAATTCGCT CACCTGGGGG CCGGATGGCT GGCTCTATGG GCTGAATGGC 
GTCTTCAATC CCAGCCACAT TAAGTATGGC AAAGACAATC CGAACTTTGC CGCCGCCGAG 
AAGGAAAAAC ATCCCGGCTG GAAGTTCACG GTGGCGATGT TCCGCATTCA TCCGCAGACG 
CGCGAATTCC AGGTCTTCTG CGAAGGGACG AGCAACCCGT GGGGGATCGC CTTCAATGAC 
GAAGGCGAAG CGTTCATCAG CGCCTGCGTC ATCGACCACC TGTGGCATCT CGTCGAAACT 
GGCTACTACC ACCGGCAGGG CGGGCCTTAT CCGCCGCACA CATGGAAGAT TGAATCGATC 
GTCAAGCACA AGCACCAGAA GGCGGCGTAT TGCGGCATCA CGTGGTTCGA CAGCGACGCC 
TACCCCGAGC AGTACCGCAA GAAACTCTAT ATGGGGAACA TCCACGGCGG ATGTATCAAT 
GTCGACCGCA TTGAGCGTAA TGGTTCGACC TACGCGGGCT TCGGCGAACC GGATTTCCTG 
ACAGCGAACG ATGCCTGGTT CATGCCGGTG GTGCAGAAGA CCGGGCCTGA TGGCTCGCTC 
TACATCCTCG ATTGGTACGA CCGCTATCAT TGCTATCAAG ACGCCAACCG CGATCCCGAG 
GGTATCGACA GGCTCAAAGG GCGGCTGTAT CGCGTCCGAT ACAAGGAGAC GCCTCGAAAG 
GCGAACTTCG ACCTGGTGAC TTCCAGCGAC GACCAGCTGG TGGAACTGTT AGCAAATCCG 
AACGTCTGGA CTCGCGGCAC CGCCCAAAGG ATTCTGGAGG AGCGGCTGTG GCGCAAGGAC 
GGGAAGAGTG ACTCGCTGCA TAAGAGGTTA TTGGCACTGG CACTCAACGA GTCGACTCCG 
GCTCACCTGC AACGAGCGGC CTTTCAAATC GCCACCTTCG CGCCTGGATT CAACAAAGAG 
CAGACAAAGC AGGCGACAGT GAATTGCGAC CCTTTGATCC GCGCCTGGGC TTTGCGCACT 
GCAGTGGGAA GCCTGATGAT CGGAACGGAC GGGCAGAGAG CGACACCTTC ATCGAACAAA 
ATAGCGGCCG CGCTGGTGAT CGAACAAATT GGCTCTGACT TAAGCGATGC AGATGCCCGT 
GTGCGCCTCC AGGCGTTGAT CGCGATGACA CGTGCTGCCG AGCAGGGCCT TACGGATGAA 
TCGCTGCATC GTGCCTTCAA GACGGCAGCT CCAAAACTCC TCGAAGATGC TCATGCCCAT 
CGGCTCGCAT GGCAGACGAT CAAAGCTTTT TATGGACGTA GACCAGAACT CCTGGGTGAT 
CTCCTCGCTT CGCCTGAATA CCGGTCGAGT GCTCTGGCGA AATCATTGGA TGGCCGGTTG 
ATGGACTGGA TCTTATCGCA GCCCCAGCCG GATGCGGTCG TGCTGCAAAC GATTCTCGCC 
ACCGATGCGG CCAGTGAGTC AGCCCGGCAG GTGCTGAACG TGCTGGCAAC TCAGATTCAG 
ACGCGGCAGC TGGCTGGGGA CCGTTTGGTG GCCGTTCGTC AGTTGGTTGG GCCGATCATC 
CAAAAAATCG TGGCCGATCC TTCGAGCCGC AACTTTGTGC CAGCCGCGCT TCTGGCGACG 
ACCTGGGGAG ACTCGGAAGG GTATGCCGCT GCTCGCAAGG TGCTGGAAAC GTCCACCTTC 
AAAGACGAGG AGCGACTGGC GGCCGCTGGG GCACTGGTGG CGGCTGGTCA GGATGAAGTA 
CTGCGGAGTG TGGCCGCCAT ATTCGATGGC AAGCCGCCCG CTGCCAGCGA ATTCAAGGGG 
AAGCTGCTGG CGACTTTGTC GCGGCTGGAT GATCCCGAAG TTGGCTCATT CGCCTTGGCC 
TACTACCCGA AGCTCACCAC CGATCTGCAG CCCAAGGCCA TCGAACTGCT CACCCAGCGA 
CCGACATGGG CTGCGGCTCT TTTGGCAGCG ATGGAGAAGA AGCAGATTCC CGCGTCAGCT 
CTCAGTTCAC TTCAGGCACG ACGCATCGCA GATCTGGGTG ATGAACAACT TTCCAAGCGG 
CTGGGTGAAG TGTGGGGACA GGTGCGTTCA GGCCGCGACC CGCAGCGGGA GCGGGTGGTT 
GCCGAGATGC GGCATCTCGT TCGCACCACC CCGGGGGACG CGGTGAAAGG CCAGCTCGTC 
TTCAGCAAGG TGTGCGGGCA ATGCCACAAG ATGTACGGCG AAGGGGCGGA GGTCGGGCCG 
GAGATCACGC TCAATGGGCG GAACGATTAC ACGCAGCTCC TTTCGAATAT CTTCGACCCG 
AACCTCGTCA TCGGTGCGGG TTATCGCTCA TGCACGGTCA TCACCGACGA CGGCCGGGCA 
CTCAGCGGTC TGTTGGCTGA AGATTCTCCC GAACGGGTGG TCCTGAAGGT GCAGGGGGGG 
AAAGTGGAGA TCATTCCCCG CAACACGATC GAGGAGTACA AGCTGAGCGA ACTTTCGCTG 
ATGCCCGAAG GGATCGAAAA GCAGTTGTCG CGTCAGGAGA TCGCCGATTT GATGGCGTAT 
GTCATCCTCG ACAAGCCGCC GGGTGACCCA AGCGCGCGGC AACTGCCAGG GGCGTTCGAA 
GTCGCGCCCC GTGAATCGAA CAACCCGGCG GAATTCGGGG CGATCTTTCA GACAGTTGCA 
CCGGGCTTTG CGGAGGTTTC CTCGGGACTC AATGGTGTCG GATTGCTCAA GGAACATGGC 
GGTCAAAAAG TTGTCGTGCG GACACATCCT GTCGATCAGA AGCGACCGAT GGTGGCGAAG 
GGAATCTTCG ACCTCCCCGC CGACAAGCCG AGCCGACTCC TGGTTCATGT GGCGCACGAC 
ACGCGCGGCG ACTTCCGGCT GGTGGTTAAG GTCAACGGAA AAGTGATCCA TGAAGAGATC 
ATCGGCAAGT CGACGACCGA GAATGGCTGG GCCCGCCGGG AGATCGATCT GGCTCCGTTC 
GCTGGGACGC AGCCTGTGAT CGAAGTCCTT AACGAAGCGA ACAACTGGGC CTACGAATTC 
GCCTATTGGG GCGAACTGCG GGTGACCAGC GAGGCGAAAT AG 

 

Protein sequence

MDHRFQPRLL LSRTVRYGLL AGLMFVGGWA TLDAQVIPHR QEKPPNDPRD ATTAAKLMTV 
PEGFTVEVVA SEPEIVNPVA MAIDEKGRFW ITESLEYPRH SAGPGRDRVK ILEDTDGDGR 
ADKFTVFLDG LNIPSAVQVG HGGVWIANAP DLLFVPDANR DGVPDGPAQV VVTGFGRDDT 
HELPNSLTWG PDGWLYGLNG VFNPSHIKYG KDNPNFAAAE KEKHPGWKFT VAMFRIHPQT 
REFQVFCEGT SNPWGIAFND EGEAFISACV IDHLWHLVET GYYHRQGGPY PPHTWKIESI 
VKHKHQKAAY CGITWFDSDA YPEQYRKKLY MGNIHGGCIN VDRIERNGST YAGFGEPDFL 
TANDAWFMPV VQKTGPDGSL YILDWYDRYH CYQDANRDPE GIDRLKGRLY RVRYKETPRK 
ANFDLVTSSD DQLVELLANP NVWTRGTAQR ILEERLWRKD GKSDSLHKRL LALALNESTP 
AHLQRAAFQI ATFAPGFNKE QTKQATVNCD PLIRAWALRT AVGSLMIGTD GQRATPSSNK 
IAAALVIEQI GSDLSDADAR VRLQALIAMT RAAEQGLTDE SLHRAFKTAA PKLLEDAHAH 
RLAWQTIKAF YGRRPELLGD LLASPEYRSS ALAKSLDGRL MDWILSQPQP DAVVLQTILA 
TDAASESARQ VLNVLATQIQ TRQLAGDRLV AVRQLVGPII QKIVADPSSR NFVPAALLAT 
TWGDSEGYAA ARKVLETSTF KDEERLAAAG ALVAAGQDEV LRSVAAIFDG KPPAASEFKG 
KLLATLSRLD DPEVGSFALA YYPKLTTDLQ PKAIELLTQR PTWAAALLAA MEKKQIPASA 
LSSLQARRIA DLGDEQLSKR LGEVWGQVRS GRDPQRERVV AEMRHLVRTT PGDAVKGQLV 
FSKVCGQCHK MYGEGAEVGP EITLNGRNDY TQLLSNIFDP NLVIGAGYRS CTVITDDGRA 
LSGLLAEDSP ERVVLKVQGG KVEIIPRNTI EEYKLSELSL MPEGIEKQLS RQEIADLMAY 
VILDKPPGDP SARQLPGAFE VAPRESNNPA EFGAIFQTVA PGFAEVSSGL NGVGLLKEHG 
GQKVVVRTHP VDQKRPMVAK GIFDLPADKP SRLLVHVAHD TRGDFRLVVK VNGKVIHEEI 
IGKSTTENGW ARREIDLAPF AGTQPVIEVL NEANNWAYEF AYWGELRVTS EAK