Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1528 |
Symbol | |
ID | 9138228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 1970855 |
End bp | 1971469 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | sugar isomerase (SIS) |
Protein accession | YP_003629560 |
Protein GI | 296121782 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.244985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGGCG CTCACCTGAA TCCGGCTGAT TATCTTTCAA GGGTTGCTCA AGTCTTTCAG ACCCTTGATT TGAAGGAAAC TGAACAACTG GCAGAAGACA TTTATTCGGC CTACGAGAAT GGCAAGTTTG TCTTCATCTG CGGGAATGGT GGCAGCGGCT CGAACAGCTC GCATTTCTGC GAAGATCTGG GGAAAAGCTC CCTCGACCGC AAAGATTTCA CTAACGATGA ACGCAAGCGG CTCAAAGTGT TATCGCTCAC CGATAACACG CCTTACATCC TGGCGTGGGG TAACGACGAA GGCTTCGATC GTGTCTTTGT AGAACAGTTG AAGAATCTCG CCTCGCCGGG AGATGTTCTG ATTGCCATCA GCGGCAGTGG AAACAGCCCG AACATTCTCA ATGCTGTCGA ATGGGCCAAT CGCAAAGGTC TCGTCACCTG GGGCATTACA GGCTATTCGG GTGGCAAACT GAAATCGCTG GGACAGAAAA ACCTGCATGT CCCGCTGGAT GACATGGGAA TTGTCGAGTG TGTCCATCTG ATTCTGTTCC ACTGGATCCT GAACGATCTC CATGGTCGCA TCAATCAGAT CGGACGCTAC CAGGTGCCAC GATGA
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Protein sequence | MLGAHLNPAD YLSRVAQVFQ TLDLKETEQL AEDIYSAYEN GKFVFICGNG GSGSNSSHFC EDLGKSSLDR KDFTNDERKR LKVLSLTDNT PYILAWGNDE GFDRVFVEQL KNLASPGDVL IAISGSGNSP NILNAVEWAN RKGLVTWGIT GYSGGKLKSL GQKNLHVPLD DMGIVECVHL ILFHWILNDL HGRINQIGRY QVPR
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