Gene Plim_1524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1524 
Symbol 
ID9138224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp1965336 
End bp1965878 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content55% 
IMG OID 
ProductThiJ/PfpI domain protein 
Protein accessionYP_003629556 
Protein GI296121778 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.447561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACCT CACCAGCCAT CCTCATGTTC ATTGGTGAAG AGTACGAAGA TCTCGAAGTC 
TGGTATCCCA AACTGAGGCT GATCGAAGCC GGTTATCAGG TCGTTTGCGC GGGGCTGGAA 
GCGAATGTGG TTTACAAAGG GAAGCACGGC TATCCCTGTC GATCGGACGC CGCCATTCGA 
GATCAGAAGT CCAGCGATTA TGTCGGGGTG ATCTGTCCGG GAGGATGGAT GCCAGACAAG 
ATTCGCCGTG AAGCGAAAGT GAAACAATTG CTGCAGGAGT TCCACGCCGA CGGCAAACTT 
GTGGCAGCGA TCTGTCATGG GGGCTGGATG CCGATTTCCG CCGGGATTTA TCGGAATGTC 
CGCACCACCG GTTCGCTGGG CATCAAAGAC GATATCGAGA ATGCCGGCGC TTTGTTTCTG 
GATCAGGAAG TTGTCGTTGA TCGTCATTTT GTGAGCAGTC GCAAGCCAGA CGACCTCCCG 
GCTTTTCTGC TGGGATGCCT CGAAGTGCTT GGAAAATCGA CCCGTGGTGA GCTGCTGGGT 
TAA
 
Protein sequence
MPTSPAILMF IGEEYEDLEV WYPKLRLIEA GYQVVCAGLE ANVVYKGKHG YPCRSDAAIR 
DQKSSDYVGV ICPGGWMPDK IRREAKVKQL LQEFHADGKL VAAICHGGWM PISAGIYRNV 
RTTGSLGIKD DIENAGALFL DQEVVVDRHF VSSRKPDDLP AFLLGCLEVL GKSTRGELLG