Gene Plim_1482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1482 
Symbol 
ID9138179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1909702 
End bp1911219 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content51% 
IMG OID 
ProductPhosphomannose isomerase-like protein 
Protein accessionYP_003629514 
Protein GI296121736 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTTTG TGATCATGGC CTTGCAGGTG CCGACCGCAA AAGTCGCGTA TGCGGTTCAA 
GTAACGATCG AGAAAAACAG AACTGTCACT CGGCATCGGT GTGTCCAGTT CAATATGTTT
GGAAATCAGC TGGCGATCAT GGTGAACTCG ATGGAAACTG AAATCGAAAC GAGTCAATTC
CTGACTGTTG ATGATCGACT TGGACGTTTG ATCCCTTTGG AAAGTTCTGA ATTGACCGGG
TCTGGTGAAA CTCTGAGTGG ATTGATGGGT TCGATTCGCC CATTAGCTTT TGAACCCGAA
CTGGTTCCGA AGGTCTGGGG AGGATGTAAA CTGCTCGAGC ACGCCGCGCG AAAGCAGAAG
ACCTCTGACT ATTCGTCATT GGTTAACGGC AATGAGATTT GCCGGATTGG CGAATCGTGG
GAGATCTCAG GCGTCGAAGG AAAATCGTCG CGTCTCAAGA TGGTCGGCCA GCATCCATCG
GAAAGTGGTC AGCAGGAGAT CTGGACACTG CAGCAACTCT GGCAGAAATT TGGGGCATCG
CTCGCCGGCT CTTCGTTCGC AACGGAGCAA TCTGATGAGC AACCACCTGA GTTTCCGTGG
CTGGTGAAGC ATCTGGAATG CAACGACTGG CTCTCGCTGC AGGTCCATCC CGCTGTAATT
CCTGGATGTA ACTCCGGTGG ATTGCCTGAA AAAGAACAAC TGAGGCTGTT CAATCCGGAT
TCAGCTAACA ACAAAGAGAC ATCAGAAAGT CCTACCGAGT CACTTGATGA AGTGCGAGGA
AAGAACGGCA AATTTGAGTT CTGGCTCGTG GTGGAAACTG CGATTGATAG TGAAATTATT
GTTGGTCCCG TGAGAGAAGA TCAGCGGGAA GAGTTAGCAC AACAGGTCGA AGCGGGAGCG
CGTGAGCATG AACTTCTGGA AGCTGGCTTG TTGACACGAC TTCCAGTCGA GGCAGGACAA
TGGGCGATTC TGCCTCCGGG AAGTGTTCAT ACTGTTCGTG GAGTGACCAT TCTGGAGGTT
CAGACTCCAG TCGATGTGAC CTACCGAATT GATGATTATG GGCGGCGTGG AAGTGATGGC
GAACTGCGTA CGCTGCATCC GCGGGAGGCT GCCCGGGCGA TCCGTTCGGG AACTGGACTT
CCACAGGTTT CACATTCGTT ACTCTGGGAA AGCCATTCGA TAAGTCATGT CGATCAAACG
ACACAGCATG AGCCGTCATC GAGATTGATT CGGCATATCA CGGCTCCCCA CGATCCATTT
CAAATTCGCT TTCGAAAGAT TGGAAACGAT CTTCAATTCC TGAATCTTGA AGAAATGACC
GTCTTGTGTG TCATTGATGG TGAGCTTGAA TTAATCTGGG AGCATGGCAC AGAACTCCTT
GCGCCACGGG ATGTTCGATT GCTTCCGGTT GATCTGAGAG AAGTATCGCT CAGGTCAAAA
GGAGCATCGG TATCAATTTT GCTGCTGACA TCGTCTTCCT CTCTCGGTTG CAACTCACCA
GCGAGTGTCC CACGATAA
 
Protein sequence
MLFVIMALQV PTAKVAYAVQ VTIEKNRTVT RHRCVQFNMF GNQLAIMVNS METEIETSQF 
LTVDDRLGRL IPLESSELTG SGETLSGLMG SIRPLAFEPE LVPKVWGGCK LLEHAARKQK
TSDYSSLVNG NEICRIGESW EISGVEGKSS RLKMVGQHPS ESGQQEIWTL QQLWQKFGAS
LAGSSFATEQ SDEQPPEFPW LVKHLECNDW LSLQVHPAVI PGCNSGGLPE KEQLRLFNPD
SANNKETSES PTESLDEVRG KNGKFEFWLV VETAIDSEII VGPVREDQRE ELAQQVEAGA
REHELLEAGL LTRLPVEAGQ WAILPPGSVH TVRGVTILEV QTPVDVTYRI DDYGRRGSDG
ELRTLHPREA ARAIRSGTGL PQVSHSLLWE SHSISHVDQT TQHEPSSRLI RHITAPHDPF
QIRFRKIGND LQFLNLEEMT VLCVIDGELE LIWEHGTELL APRDVRLLPV DLREVSLRSK
GASVSILLLT SSSSLGCNSP ASVPR