Gene Plim_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1406 
Symbol 
ID9138101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1791217 
End bp1792998 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content56% 
IMG OID 
Productacetolactate synthase, large subunit, biosynthetic type 
Protein accessionYP_003629439 
Protein GI296121661 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.345903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGATCG TCGAGCGACC GCAGACCAAA ACGCAAACCA TCAACGGCGC GGAAATTCTG 
GTGCGGGGGC TAATTCGTCA GGGTGTAGAC GTCATTTTCG CCTACCCTGG TGGATGTAGT
ATGCCGCTGC ACCAGGCACT GACCTTCCAC ACGGACGAGA TCCGCACGAT CCTCCCGCGT
CATGAACAGG GTGGCGGATT CGCCGCACAG GGTGTGGCCC GTACAACCGG TGAAGTCGGC
GTGTGTATGG CGACCAGTGG CCCCGGTGCC ACGAATCTCG TCACCGCAAT CGCTGATGCC
AAGATGGACA GCATTCCGCT GGTGGCCATT ACCGGTCAGG TGCCAACAAC GGTCATCGGC
ACTGATGCTT TTCAAGAAAC ACCCATCGTT GAGATCTGTC GAGCGATCAC CAAGGCCCAT
TACCTGATCA CCGATGTCCG CGATACTGCA CGCATCGTCA AAGAAGCTTT CTATATCGCC
CGCACCGGCC GACCCGGGCC TGTGCTTATT GACTTCCCGA AGAACGTGCA GCTCGCGACG
ATCGACGAGG AGCCTGATCT CGATCCACCG ATGAATCTGC CCGGTTACCA TCCGGAGATT
CGCAAGCCGA CCTCTTCTCA GATCCGCGAG ATTCTCGCTG CAATCCGTGA ATCCAAGAAG
CCAATTTTTT ACATTGGCGG TGGTGTCGTT CAATCAGATG CTTCCGAAGA GTTCACCAAG
TTCGCCCTCA AGACGGGCAT CCCGGTGGCC ACCACCGTGA TGGGGATCGG GGCTTTCCCG
GGTGATCATC CGCAGTCGCT GCACATGCTC GGCATGCATG GCACTGCCTA CTCGAATATG
GCCATCGCTG AAGCCGACCT GCTCATTGCA CTGGGCGTGC GATTTGATGA TCGCGTCACA
GGGAAACTCG ACGAGTTCGC CAAGCATGGC CGCATCATCC ACGTCGATAT CGATCCTTCG
GAGCTCCACA AGAACAAAAA AGCTCACATC CCGATTGTTG GGAACGTGAA AGATGTTCTC
CATGGGCTGA ATGCTCTGGT GAGCGATGAT GATATCCCTG AGATGGATGC CTGGTGGCGG
CAACTCAATG AATGGCGCGA CAAATATCCT TTGAAGTACC GCGATTCAGG TGATTTCATC
ATCCCGCAAT ATGCGATTGA CGAGCTCTGG CGACAGACGA AAGATCGCGA TGCTTACGTC
AGTGTGGGGG TGGGTCAGCA CCAGATGTTC GCTGCCCAGT TCTACAAGTT CAGCAAGCCC
CGCCGCTGGT TGAGCAGCTC GGGTCTGGGA ACGATGGGTT TCGGTTTGCC AGCCGCCATG
GGTGTTCAGG CCGCCTTCCC CGATGCTTTA AGTATTGATA TCGATGGTGA TGGCTGCATG
CTCATGAATG TTCAGGAGCT GGCCACTCTT GCCTGCGAAA AACTTCCCGT GAAAATTCTC
CTGTTGAACA ATCAGCACCT GGGGATGGTG GTTCAGTGGG AAGATCGTTT CCATGAGGGG
AATCGGGCAC ACACCTATCT GGGGCCGATC GATCACCCGG AAGCCGTGGG TGCCGGCGAT
GGAACTCACT ACGAAGAAAC CTATCCAAAC TTTGTGCAGA TCGCCAAAGG CTTTGGTGTC
GAAGCAAGTC AGGTGCGGAG TAAGAAGGAG TTCCCGGCAG CTCTGGCCAA AATGCTGGCC
TACCCAGGTC CCTACCTCCT CGATGTGCTG ACACCTTACC AGGAACATGT TTTGCCCATG
ATTCCCAGTG GCAAAACGGT GAAAGACATC ATCCTCGAGT AG
 
Protein sequence
MAIVERPQTK TQTINGAEIL VRGLIRQGVD VIFAYPGGCS MPLHQALTFH TDEIRTILPR 
HEQGGGFAAQ GVARTTGEVG VCMATSGPGA TNLVTAIADA KMDSIPLVAI TGQVPTTVIG
TDAFQETPIV EICRAITKAH YLITDVRDTA RIVKEAFYIA RTGRPGPVLI DFPKNVQLAT
IDEEPDLDPP MNLPGYHPEI RKPTSSQIRE ILAAIRESKK PIFYIGGGVV QSDASEEFTK
FALKTGIPVA TTVMGIGAFP GDHPQSLHML GMHGTAYSNM AIAEADLLIA LGVRFDDRVT
GKLDEFAKHG RIIHVDIDPS ELHKNKKAHI PIVGNVKDVL HGLNALVSDD DIPEMDAWWR
QLNEWRDKYP LKYRDSGDFI IPQYAIDELW RQTKDRDAYV SVGVGQHQMF AAQFYKFSKP
RRWLSSSGLG TMGFGLPAAM GVQAAFPDAL SIDIDGDGCM LMNVQELATL ACEKLPVKIL
LLNNQHLGMV VQWEDRFHEG NRAHTYLGPI DHPEAVGAGD GTHYEETYPN FVQIAKGFGV
EASQVRSKKE FPAALAKMLA YPGPYLLDVL TPYQEHVLPM IPSGKTVKDI ILE