Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1406 |
Symbol | |
ID | 9138101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 1791217 |
End bp | 1792998 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | acetolactate synthase, large subunit, biosynthetic type |
Protein accession | YP_003629439 |
Protein GI | 296121661 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.345903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCGATCG TCGAGCGACC GCAGACCAAA ACGCAAACCA TCAACGGCGC GGAAATTCTG GTGCGGGGGC TAATTCGTCA GGGTGTAGAC GTCATTTTCG CCTACCCTGG TGGATGTAGT ATGCCGCTGC ACCAGGCACT GACCTTCCAC ACGGACGAGA TCCGCACGAT CCTCCCGCGT CATGAACAGG GTGGCGGATT CGCCGCACAG GGTGTGGCCC GTACAACCGG TGAAGTCGGC GTGTGTATGG CGACCAGTGG CCCCGGTGCC ACGAATCTCG TCACCGCAAT CGCTGATGCC AAGATGGACA GCATTCCGCT GGTGGCCATT ACCGGTCAGG TGCCAACAAC GGTCATCGGC ACTGATGCTT TTCAAGAAAC ACCCATCGTT GAGATCTGTC GAGCGATCAC CAAGGCCCAT TACCTGATCA CCGATGTCCG CGATACTGCA CGCATCGTCA AAGAAGCTTT CTATATCGCC CGCACCGGCC GACCCGGGCC TGTGCTTATT GACTTCCCGA AGAACGTGCA GCTCGCGACG ATCGACGAGG AGCCTGATCT CGATCCACCG ATGAATCTGC CCGGTTACCA TCCGGAGATT CGCAAGCCGA CCTCTTCTCA GATCCGCGAG ATTCTCGCTG CAATCCGTGA ATCCAAGAAG CCAATTTTTT ACATTGGCGG TGGTGTCGTT CAATCAGATG CTTCCGAAGA GTTCACCAAG TTCGCCCTCA AGACGGGCAT CCCGGTGGCC ACCACCGTGA TGGGGATCGG GGCTTTCCCG GGTGATCATC CGCAGTCGCT GCACATGCTC GGCATGCATG GCACTGCCTA CTCGAATATG GCCATCGCTG AAGCCGACCT GCTCATTGCA CTGGGCGTGC GATTTGATGA TCGCGTCACA GGGAAACTCG ACGAGTTCGC CAAGCATGGC CGCATCATCC ACGTCGATAT CGATCCTTCG GAGCTCCACA AGAACAAAAA AGCTCACATC CCGATTGTTG GGAACGTGAA AGATGTTCTC CATGGGCTGA ATGCTCTGGT GAGCGATGAT GATATCCCTG AGATGGATGC CTGGTGGCGG CAACTCAATG AATGGCGCGA CAAATATCCT TTGAAGTACC GCGATTCAGG TGATTTCATC ATCCCGCAAT ATGCGATTGA CGAGCTCTGG CGACAGACGA AAGATCGCGA TGCTTACGTC AGTGTGGGGG TGGGTCAGCA CCAGATGTTC GCTGCCCAGT TCTACAAGTT CAGCAAGCCC CGCCGCTGGT TGAGCAGCTC GGGTCTGGGA ACGATGGGTT TCGGTTTGCC AGCCGCCATG GGTGTTCAGG CCGCCTTCCC CGATGCTTTA AGTATTGATA TCGATGGTGA TGGCTGCATG CTCATGAATG TTCAGGAGCT GGCCACTCTT GCCTGCGAAA AACTTCCCGT GAAAATTCTC CTGTTGAACA ATCAGCACCT GGGGATGGTG GTTCAGTGGG AAGATCGTTT CCATGAGGGG AATCGGGCAC ACACCTATCT GGGGCCGATC GATCACCCGG AAGCCGTGGG TGCCGGCGAT GGAACTCACT ACGAAGAAAC CTATCCAAAC TTTGTGCAGA TCGCCAAAGG CTTTGGTGTC GAAGCAAGTC AGGTGCGGAG TAAGAAGGAG TTCCCGGCAG CTCTGGCCAA AATGCTGGCC TACCCAGGTC CCTACCTCCT CGATGTGCTG ACACCTTACC AGGAACATGT TTTGCCCATG ATTCCCAGTG GCAAAACGGT GAAAGACATC ATCCTCGAGT AG
|
Protein sequence | MAIVERPQTK TQTINGAEIL VRGLIRQGVD VIFAYPGGCS MPLHQALTFH TDEIRTILPR HEQGGGFAAQ GVARTTGEVG VCMATSGPGA TNLVTAIADA KMDSIPLVAI TGQVPTTVIG TDAFQETPIV EICRAITKAH YLITDVRDTA RIVKEAFYIA RTGRPGPVLI DFPKNVQLAT IDEEPDLDPP MNLPGYHPEI RKPTSSQIRE ILAAIRESKK PIFYIGGGVV QSDASEEFTK FALKTGIPVA TTVMGIGAFP GDHPQSLHML GMHGTAYSNM AIAEADLLIA LGVRFDDRVT GKLDEFAKHG RIIHVDIDPS ELHKNKKAHI PIVGNVKDVL HGLNALVSDD DIPEMDAWWR QLNEWRDKYP LKYRDSGDFI IPQYAIDELW RQTKDRDAYV SVGVGQHQMF AAQFYKFSKP RRWLSSSGLG TMGFGLPAAM GVQAAFPDAL SIDIDGDGCM LMNVQELATL ACEKLPVKIL LLNNQHLGMV VQWEDRFHEG NRAHTYLGPI DHPEAVGAGD GTHYEETYPN FVQIAKGFGV EASQVRSKKE FPAALAKMLA YPGPYLLDVL TPYQEHVLPM IPSGKTVKDI ILE
|
| |