| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1405 |
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| Symbol | |
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| ID | 9138100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 1789194 |
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| End bp | 1790822 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003629438 |
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| Protein GI | 296121660 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.407034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCTCAC CTCTCAGTAC GAGTTCAACC TCGTCTACGG GTGTTCAAGC CTCTCGCAGT
GAACAGTCGC AGGCGGCTCA GATCTGGCGC GAGTTCAAGA AACGAAGACT CGCAGTCTTT
GCGGCCATTC TCATGATTGT CGAAATCATG ATTGCGGTCT TTGCACCGTT CATTGCGAAT
GACAGGCCGA TGGCCTTTCG CGGCGTGAAT CGCTTCGAGT TCCAGCAGTT GATTCAGACT
GTGGAATCTC TGATGGCAAT GGCCAACGGT GAAAGTCGCC AGGAGAGTGG GGCGGCAAAA
AAGGTCTATC CAGTTCTGGA AAAGGCCCAG TCATTGCTGG AGACAGCCTC CGCAGAAATT
GATGTTTCCA AGTCCGGCGG AAGCGAATCC CGCAGGCAAT TTGAGGGTTT GATCCGACGA
ATTCAGGATA TGCAGAAACC CCTCGGCTCG TTTCCCGACC AGACCTCGGC CTTGCCGCCA
GAACTGATTC AGGGAATTCA GGCAATTCTT ATGGATGTCA AAACGCTGAA GAAAAGCGAA
TTGCCTCCAC TTCTCTCCCG CTGGTACTTT CCGGCACTCG CACAACTCAA TGGAATCGAC
TTCTGGTTTA TTGCCGCTGC CATTTTCTGG CCACTTTGGT GGTTTGCCAC GCGACTCTCG
ACGTTCGCTT ATCGACAACC TCGCTGGGTG CAACTGCTCG TTCTATCTGG CGTTCCCACA
CTGGCTGCAG GCATTTGGGT CGAAATCAAC CCCTCTCGAC TCGATCAGAC CAATTACAAG
CAAGGTGTGC TGACGGCGTA CGACTTCTCT CGCACCGCCC CGGTGATCTT CGATGTTGTC
GTCTGGCCAC TGGTTCCTTT TGGCATCGAT GAGTACGACA CGACCAATCA GACAAAGCCA
CCCGCCTTTT CGCTCAAGGA ACCGCAAAAG CTCGCCACGC CGTGGGATCG CCCGCACTGG
CTGGGGACGA ATCACAATGG TGTCGATCTC CTGACACTTC TCATCTGGGG AGCACGCATC
AGCCTTTCGG TCGGTCTGGT CGCGGTTCTG ATCTACATGT CGATCGGGAT TGTCCTCGGT
GCTCTGGCGG GCTACTTCCG CGGTTGGGTC GATATTCTGA TCTCACGTCT GATTGAAGTC
GTCATCTGCT TCCCGACACT ATTCCTCGTA TTGACGATTG TGGCTCTTCT GAAACCCAGC
CTCATCAACA TCATGATTGT CATCGGCTTG ACCGGCTGGA CAGGTGTGGC CCGGTTAGTT
CGCAGCGAGT TTTTGCGGCT GGTGAATCAG GAATTTGTGC TGGCTGGCAA GTCGATTGGC
TTTTCCTCCA CGCGGCTCAT TTTCCGACAC ATCCTCCCCA ATGCCCTGGC CCCTGTGGTC
GTGGCGGCGA CATTTGGTAT TGCCGGAGCC ATCCTGCTTG AAAGCTCACT GTCATTTCTA
GGGCTGGGTG TCCGTGTTCC TACACCTTCC TGGGGCACAA TTCTCAGTGA AGGCCGCACT
CGCCTGCTGC AGGCTCCCTG GCAGATGACG TATCCCGGAT TCGCCATTTT CATCACCGTC
ACCTGCTACA ATCTGATTGG CGAGGCGCTG CGGGATGCGG CTGATCCAAG GCTCCGCGGC
ACACGATAA
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| Protein sequence | MASPLSTSST SSTGVQASRS EQSQAAQIWR EFKKRRLAVF AAILMIVEIM IAVFAPFIAN
DRPMAFRGVN RFEFQQLIQT VESLMAMANG ESRQESGAAK KVYPVLEKAQ SLLETASAEI
DVSKSGGSES RRQFEGLIRR IQDMQKPLGS FPDQTSALPP ELIQGIQAIL MDVKTLKKSE
LPPLLSRWYF PALAQLNGID FWFIAAAIFW PLWWFATRLS TFAYRQPRWV QLLVLSGVPT
LAAGIWVEIN PSRLDQTNYK QGVLTAYDFS RTAPVIFDVV VWPLVPFGID EYDTTNQTKP
PAFSLKEPQK LATPWDRPHW LGTNHNGVDL LTLLIWGARI SLSVGLVAVL IYMSIGIVLG
ALAGYFRGWV DILISRLIEV VICFPTLFLV LTIVALLKPS LINIMIVIGL TGWTGVARLV
RSEFLRLVNQ EFVLAGKSIG FSSTRLIFRH ILPNALAPVV VAATFGIAGA ILLESSLSFL
GLGVRVPTPS WGTILSEGRT RLLQAPWQMT YPGFAIFITV TCYNLIGEAL RDAADPRLRG
TR
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