| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1404 |
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| Symbol | |
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| ID | 9138099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 1788040 |
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| End bp | 1789092 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003629437 |
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| Protein GI | 296121659 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.734865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACGT ATATCTTTCG ACGACTGCTG CTGATGATTC CGACGTTGTT CGGAATTCTC
GTGCTGTCAT TCATCGTCAT TAAATCCACA CCTGGCGATC CTGCCTCTGG TCGTTTTGGT
GGTGCTGCTG CGGCGCAAGG CGGAATGAAT GCCGAGCGTG GGACTGAGGA CGCGGAAAAA
GCCTTCCGTA AGAACTTCAA ACTGGATGAA CCGCTGTATG TCCAGTTTTT CTGGTTTGTG
GGGCGCATCT TCCGTGGCGA AATGATTTAC TACACCAAGC AAGGCTCCAT CTGGCCCGAT
CTCATCCCGG CAATGAAGAT CACACTCATG ATCAACTCGA TCGTGTTCTT GCTGGTCTAT
CTCCTGGCAA TTCCCATGGG GATTTTCAGT GCGACCGCCC CTCACAGCAC GGGCGATCGA
ATCATGACAC TCACTCTGTT TGTGCTCTAC AGCCTCCCGT CCTTCTGGGT GGCGGAAATG
CTGCGGCTGG GAGTGCTCGA ATCGAATGCC GCATGGAATG CTGCAATGCT CAGCCAGGAT
GCTCAAGAAT GGATGTTTAA TTACCCAATC AGCGGATTGC ACGATGTCAA TGCGGATCGA
TTCAGTTTGT TCCAATGGCT ATGGGACTAT ACGCTGCATC TGGTGCTCCC CATACTTTGT
ATGACTTACG CCTCTTTGGC GTACATCAGT CGACAGATGC GTGCGGGCAT GCTGGAGGTC
GTCCGGCAGG ATTACATTCG CACGGCCAAA GCCAAAGGCT GCAGCCCCGC GCGAGTCATC
TGGGTGCATG CTCTTCGCAA CAGCCTCTTT CCCATCATTA CGTTATTTGC TTCACTTCTT
CCCGCTCTGA TTGGCGGCAG TGTCATCATC GAATACATTT TCAACATTCC CGGCATGGGT
AAACTCACCA TCGACAGTGT GTTTTCGCGT GAGTACGACA TGATTCTCGT CACGATGATG
CTTTCAGCGG TATTGACTTT GATTGGAATT CTGATTTCCG ACATCATGTA TGTTCTGGTC
GATCCCCGCG TCTCGTTCGA AAGCAAGAAC TGA
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| Protein sequence | MATYIFRRLL LMIPTLFGIL VLSFIVIKST PGDPASGRFG GAAAAQGGMN AERGTEDAEK
AFRKNFKLDE PLYVQFFWFV GRIFRGEMIY YTKQGSIWPD LIPAMKITLM INSIVFLLVY
LLAIPMGIFS ATAPHSTGDR IMTLTLFVLY SLPSFWVAEM LRLGVLESNA AWNAAMLSQD
AQEWMFNYPI SGLHDVNADR FSLFQWLWDY TLHLVLPILC MTYASLAYIS RQMRAGMLEV
VRQDYIRTAK AKGCSPARVI WVHALRNSLF PIITLFASLL PALIGGSVII EYIFNIPGMG
KLTIDSVFSR EYDMILVTMM LSAVLTLIGI LISDIMYVLV DPRVSFESKN
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