| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1382 |
|---|
| Symbol | |
|---|
| ID | 9138077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 1761694 |
|---|
| End bp | 1762584 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | glycosyl hydrolase |
|---|
| Protein accession | YP_003629415 |
|---|
| Protein GI | 296121637 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.213541 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGTGA TCTGCAAGAG TTTTCTGGTG CTGGCGTTGG GTTGGTTGAG CCTGTTCGCG
GGACAGGAAG GATCTTTACA GGCAGCTGAT GCACCTGCCA AGAAGTACAA AGCCCTCATG
CTGACTCAAA GTGCAGGATT TACGCATGGC TCGGTACGTC GCCCGAAAGC TGAAGGCGAT
GCACCGCAGA AGCTGAGTGC GTCAGAAATC GCGATGACAC AACTCGGCCA GCAGACCGGT
CTGTTTGATG TGACCTGTAC GCAGGATGCC GCCAGCGATT TCACGAAAGA GAACCTGTCC
AAGTACGACA TGGTGATTTT CTACACGACT GGCAATCTGC CCATTGCCGA TGCCGATAAA
GAATACTTTC TCAATGACTG GCTAAAGCAG GAAGGTCATG CCTTCATCGG GTTCCATTCC
GCGACAGATA CGTTCAACAA CTACAAACCC TATTTTGATT TTGTAGGTGG TACGTTTGAT
GGACATCCCT GGGGAGCAGG CGAGACAGTC ACCATCAAGA TTCACGATCC TGAGTTTCCC
GCGATGAAGC CACTGGGGAG CGAACTGGTC GTCAAGGACG AAATCTATCA GTACAAAAAT
TATCGGCCTG AAAACGTCCG AGTATTGATG AGCCTCGATA TGTCCAAGTG CAAAACCAAG
CGTCCTTACA TGGTGCCGGT CTCGTGGGTA AAAGAACATG GCAAGGGGCG ATTGTTCTAC
ACCAATCTGG GCCATAATGA AGGCACCTGG ACCAACCCCA CTTTCCTGGA GCATGCTCAT
CAGGGAATTC GTTGGGCCTT GCGGCTCGAA GAAGGAAATG CCACGCCGAA TCCTGAGCTT
CAGGCCAAAC TTCAGGAAGA GGCCAAGGCA GCCGCAGAGC CTGCCAAGTG A
|
|---|
| Protein sequence | MRVICKSFLV LALGWLSLFA GQEGSLQAAD APAKKYKALM LTQSAGFTHG SVRRPKAEGD
APQKLSASEI AMTQLGQQTG LFDVTCTQDA ASDFTKENLS KYDMVIFYTT GNLPIADADK
EYFLNDWLKQ EGHAFIGFHS ATDTFNNYKP YFDFVGGTFD GHPWGAGETV TIKIHDPEFP
AMKPLGSELV VKDEIYQYKN YRPENVRVLM SLDMSKCKTK RPYMVPVSWV KEHGKGRLFY
TNLGHNEGTW TNPTFLEHAH QGIRWALRLE EGNATPNPEL QAKLQEEAKA AAEPAK
|
|---|
| |