Gene Plim_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1372 
Symbol 
ID9138067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp1745959 
End bp1746525 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629405 
Protein GI296121627 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.534627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTTCA GCCGAATTGG AGGCGAAAGT GGCGAAAGTA CAACTTTTCG CCAAGTTTCT 
TCAGTCAATT CCCGATGTCA AAAGTACGGG GGAGATTTCG TGGTCAGGAT GACCGGCGAA 
ATTTGCCGCT CGAATGTGGT CTGGAATCGG GCTGTTAGCT CGTGCGGAGA TGGATGTCCG 
ATGGGAATGC TCAGTCCCGA ACTTATGCTC GCCATTGAAC AGGCGGCCCA CGAAATGTTG 
ATGTGGGTAG GCTTTGGCAC GCTGGTTGGG CTGTGTGGCA AAGCCATCAT GCCCGGGAAA 
GATCCCGGCG GTGCTGTGGG GACTGTTTGT ATCGGGATTT CCGGGAGTGT GATTGGTTGC 
GGATCTTTAC TGTTGTGGGA TTCGTCACTG CGAATCTCGC CTATCAGTGT TAGTGGATTT 
ATAGCCGCTA CTGCTGGAGC TTTTGCCCTC CTCTTGTTTT ACCGGATTCT GTCGAACTCG 
TACTTCATTG TGGAAGCGGT CGATGGCGGA GATCTCAACA GTGGTGAGCG GGTGACTTAC 
CGTCGCCGTC GCCGAACAGC CGCTTAG
 
Protein sequence
MQFSRIGGES GESTTFRQVS SVNSRCQKYG GDFVVRMTGE ICRSNVVWNR AVSSCGDGCP 
MGMLSPELML AIEQAAHEML MWVGFGTLVG LCGKAIMPGK DPGGAVGTVC IGISGSVIGC 
GSLLLWDSSL RISPISVSGF IAATAGAFAL LLFYRILSNS YFIVEAVDGG DLNSGERVTY 
RRRRRTAA