| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1349 |
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| Symbol | |
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| ID | 9138043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 1719918 |
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| End bp | 1722911 |
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| Gene Length | 2994 bp |
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| Protein Length | 997 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | protein-export membrane protein SecD |
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| Protein accession | YP_003629382 |
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| Protein GI | 296121604 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.853966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGGTT TGTTTTCAGG TTTCACATTG CTTCAGGCAT CGCCGGCTGT CGCGGACGCC
CCACCAGGTG CCCCGACGGC CAACGTCTGG TTGCTGGGCA TTATTGCTTT GTGCGTGCTG
ACGATCCCCT TCCTGCTGGG AACCCTGGTT GCGGGTGCTC TGCGGATGAA GGACATCGCT
TTCCGCCTGA GCCTGGTGTT CTTCGTGACG GCCTTGTCAC TAACGCCATT TATCTACAGT
GGTGTGAGTG GTGAAGGGCT ACTTAAAGCC ATTCCACTGG GGATTGACCT CGCTGGTGGA
ACCAATCTGG TTTATCAGAT TGATGTTGAT GCCGCCAAAA AGGATGGAAA AAACCTTGAT
ATCAATACCG TCGAACAGCT CGTCCAGGCG ATTGGCAAGC GACTTAATCC TTCGGGTGCG
GAAGAGATCA CGATTCGTCG CGTGGGGCGA GATCGTATTG AAGTCATCAT TCCCGGTGCC
GACAAAGACA TTGTCGAACA GAAGAAGCGA TTGATCACCC GGCTGGGAAG TCTGGAATTT
GCCATTCTGG CCAATGCCCG TGATCATGCT TCGATCATCA GCCGGGCCAA TCAGTTACCG
GATGGAACAG ATGATCTTCG TGACGACAAA CTGCTGGTTG CCAGTTGGCG CACCGTTGCT
GATGGCAAGA ATGTGGGCCA GAACGCAAAT GATCAGACGC AGTTGCGGGT CGTCAAGCGG
CGGAATGACA AAGGTGAACT GGTTGATGTC CAGCAGTTTC TCGTCGTTCA TGAAACCCCT
GACAAGCAGG TAACGGGTAA GCTACTGCAG GATGCCGGTT ATCGTCCTGA TCAGCAGGGA
CGTCCTGCGG TTTCATTCCG CATGACGACG ACAGGTTCGA TTCGTCTGGA TGCACTCACT
GCCAAATATG CTCCCGATCC AGTGGATAAG TTCGAGCGTC GTCTGGCAAT TCTTCTCGAT
GGAAAAGTCT ACTCGGCACC TAACCTCCGA GACCGCTTGT CATCTGGCGG CGGTGAGATC
ACGGGCGATT TTGATCGTAA AGAAGTCGAT GAACTCGCTG GAGTCCTCAA TGCGGGGGCT
TTGGAAGTCC CTTTGATTCC GACGCCTGTG AGTGAATTTA CAATCAGTCC ACTCCTTGGG
GCTGATGTGC AGCAGAAAGG TTTGCTGGCG ATTGCACTCT CGGCGGCTGC CGTCTTCATC
TTCATGGCGG TTTACTACAT GGTCTCTGGT TTGGTGGCCG ACATGTGTCT GGTGCTGAAC
CTGATCATGG TGGTGGGAGC GATGGCGTTT ATCGATGCCA CCTTCACACT GCCTGGTTTG
GCTGGTCTTG TGTTGACCAT TGGTATGGCG GTTGATGCCA ACGTGCTGAT TTACGAACGA
TTCCGCGAAG AAATGGCCCG CGGCGCCAGT CTCCGGCTGA CTATCCAGAA TGGCTTCGAC
AAGGCACTTT CGGCCATTGT CGACGGTAAC GTGACCACTC TGATTACGGC GGTCATTCTC
TTCATGATTG GCACCGATGC CGTGAAGGGC TTTGCCGTTT CGCTGTTTAT TGGTTTGAGT
GCGTCGATGT TCGCGATTCT GGTGTTTGGT CGCATCTGCT TCGACATCAT TGAACGCAAG
CGGCTGGTCA AATCCTTGTC GATGATGCCG ACCATCAAGC TGAACGGTGT CGATTTTCTG
GGGATGCGAG TACCAGCCAT CCTGTTTTCA GTGGTGGTGA TCGCGGTCGG GATGTTCGCT
CTGGTTTCAC GCGGCAAAGA CAATCTCGAT ATCGACTTTA CTGGCGGTAC CATGGTGACT
CTGGAATTCC AGAAGTCACA AGAAACGGCC GTTGTTCGCG AGAAACTCGA TGCCAAGTTC
CCGACAGCAA TTTCTCTGGA AGAACTGCGG CTGAACGATG AATCTGCAAC TGCAGGGACT
CGTTTCCGCA TCCGCACAAG TTTGATTGAT CGAGAACAGG TTCGCGGATT GATCAACGAG
TCGTTTGCAG ACCCTGAGAC CGCACTCACG AGAGTGCAGT TGAGTTTTGG AGACATCACG
CCTGTGACGG CCGATGACTC GAAGACCATT CGAATCAGGC CAGGGACGAA TATCGACAAG
TTTACCGGTG GGCATCGAGT TCCACTGACG TTTACAGGTC CGGTGGCTGA AGCGACTGTC
GCTGAATATC TGGCGGAACA ACTCAAGAAG TTCCCTGGAA AAGATTCTCA GCCTAGGTAT
GACTCGGCGA TTGGGATGGT GCTGGTCGAT GGTGTGAGTG CCGGTGGTCA GTCCACGACC
GGAAAATTCA CAGAATTGGT TGCTCGTGTG GCTCCGGATG TCTCGAATGA AGATCTGGCC
GAGGCACTGA AGGCCTTGGC AACACAACTG GCTAACGAGC CGATCTTTGA TGAGTTCAAT
TCGTTTACGA CCTCGGTTGC AGCAGAAACT CAGCAGAACG CACTGTTGGC CATTTTGTTG
AGTCTGGTGG CGATTGTGGT TTACATCTGG TTCCGCTTTG AGAAGCTCTA TTACGGTTTT
GCTGCCGTTG CGGCACTGAC ACACGACGCC CTCGTTGTGC TGGGGAGTGT GGCTTTGGGC
GCATGGTTGT CACAGACACC CATCGGGCCG ATCCTGGGGC TGGAAGATTT CAAGATCAAC
ATGGGCTTCA TTGCGGCGAT TCTGACCATC ATTGGTTATT CGCTGAATGA CACCATCGTG
ATCTTTGATC GTATCCGTGA AATTCGCGGC AAAAACCCGA ATGTCACCTA CGATATGATT
AATCTGAGCG TGAATCAGAC CATGTCGCGA ACGATTCTAA CTGCTACGAC TGTTTTGATC
GTCGTGGTGA TTCTGTATCT CTTTGGCGGA GAAGGGATTC ACACCTTCGC CTACAGCTTT
ATCATCGGAA CCATCGCGGG TACTTATAGT ACGATCTTCA TTGCCAACCC CGTGCTGTAC
TGGCTGGTGA GTCGACAGCA GGCCAAGTCG GGTCCTGCCA AGGTCACAGC CTGA
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| Protein sequence | MEGLFSGFTL LQASPAVADA PPGAPTANVW LLGIIALCVL TIPFLLGTLV AGALRMKDIA
FRLSLVFFVT ALSLTPFIYS GVSGEGLLKA IPLGIDLAGG TNLVYQIDVD AAKKDGKNLD
INTVEQLVQA IGKRLNPSGA EEITIRRVGR DRIEVIIPGA DKDIVEQKKR LITRLGSLEF
AILANARDHA SIISRANQLP DGTDDLRDDK LLVASWRTVA DGKNVGQNAN DQTQLRVVKR
RNDKGELVDV QQFLVVHETP DKQVTGKLLQ DAGYRPDQQG RPAVSFRMTT TGSIRLDALT
AKYAPDPVDK FERRLAILLD GKVYSAPNLR DRLSSGGGEI TGDFDRKEVD ELAGVLNAGA
LEVPLIPTPV SEFTISPLLG ADVQQKGLLA IALSAAAVFI FMAVYYMVSG LVADMCLVLN
LIMVVGAMAF IDATFTLPGL AGLVLTIGMA VDANVLIYER FREEMARGAS LRLTIQNGFD
KALSAIVDGN VTTLITAVIL FMIGTDAVKG FAVSLFIGLS ASMFAILVFG RICFDIIERK
RLVKSLSMMP TIKLNGVDFL GMRVPAILFS VVVIAVGMFA LVSRGKDNLD IDFTGGTMVT
LEFQKSQETA VVREKLDAKF PTAISLEELR LNDESATAGT RFRIRTSLID REQVRGLINE
SFADPETALT RVQLSFGDIT PVTADDSKTI RIRPGTNIDK FTGGHRVPLT FTGPVAEATV
AEYLAEQLKK FPGKDSQPRY DSAIGMVLVD GVSAGGQSTT GKFTELVARV APDVSNEDLA
EALKALATQL ANEPIFDEFN SFTTSVAAET QQNALLAILL SLVAIVVYIW FRFEKLYYGF
AAVAALTHDA LVVLGSVALG AWLSQTPIGP ILGLEDFKIN MGFIAAILTI IGYSLNDTIV
IFDRIREIRG KNPNVTYDMI NLSVNQTMSR TILTATTVLI VVVILYLFGG EGIHTFAYSF
IIGTIAGTYS TIFIANPVLY WLVSRQQAKS GPAKVTA
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