Gene Plim_1329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1329 
Symbol 
ID9138023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1697482 
End bp1698732 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content54% 
IMG OID 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_003629362 
Protein GI296121584 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCAAT TTGCCGACCA GAGGATTATC GAACTTGACG TTCGCACCGA CGAAATGCTG 
GTCAATATGG GGCCACAACA CCCCAGCACG CATGGTGTTT TGCGACTTGT ACTCCGAACT
GACGGCGAAA TTGTTCACGA AGTCATTCCT CACCTGGGAT ATCTGCATCG CTGTGCCGAA
AAAATCGGTG AGCATCTCGC ACCTCCCCAG TGGGTTCCTT ACACAGACCG CATGGATTAT
CTCGCGGCCA TGAACATGAA CCTGGGTTTC TCCCTGACAG TGGAGAAACT CATGTCGCAG
GTGGCTCCTC CAAAAGCTCA GTTAATCCGG GTCTTTGTCG CTGAACTCAA CCGCATTGCC
AGCCATCTTC TCGGGATGGG TGCCTACGGG CTCGACCTGG GTTCATTTAC CCCCTTTCTT
TATGGGTTTC GCGAGCGCGA AATTATTCTT GATCTGCTCG AAGAGGTTTG CGGCGCTCGA
CTGACTTACA GCTACGTCAC TCCGGGTGGA GTCACTCACG ATCTCCCCGA AGCCATCCCG
ATTCCACCTG GTCTGGCGAT GCTCACCGGC AGGCCAGCGG GTGCCACGAT CTCGTGGGTC
GACGCCGTGA TTCTCTTCCT CGATTGGCTG GGCCCCAGAA TCGATGACTA CCATACACTT
CTGACAGAAA ATCATATCTT CGTCCAAAGG ACAGCCGGCC TGGGAGTGTT GACTCGCGAA
AAAGCCATCT CTTACGGCTG CTCAGGGCCC GTGCTTCGCG GGAGTGGAGT GGAGTTCGAT
CTTCGTCGTC ATGGAGATAA AATCTATACG TCCCTCTACG AAAAGTTTGA GTTCGATATC
CCCACGGCCC CTTTTCGCAA TGCTCCGCGC GAAGTCATTG TGGGGGATAA CTGGTGTCGT
TTTTATGTCC GCATGCTGGA AGTCACACAA TCGATGCGCA TCTTGAGGCA AGCAGCCGAT
CTTTGGACGA TTGGCGGAGT TTCTCAGGAT CCCGCCGGAC ACAAAGTCCC CTATCGGCTG
ACAACCAAAC TTCCTGCTGC AGAAGTTTAT CTGGAAACAG AATGCCCTCG CGGCCAGATG
GGTTTCTACG TCATCGGCAA TGGAGCTGCC GAACCTCTCC GGACTCGAGC AAAAAGCTCC
TCGTTCTGTA ATCTCTCGGT GATCAGCGAA CTCTGCCAGG GAGTCCTCCT GGCAGACATC
CCCTCAATCG CCGGCTCTCT CGATATCGTG ATGGGCGAGA TCGATCGATA A
 
Protein sequence
MPQFADQRII ELDVRTDEML VNMGPQHPST HGVLRLVLRT DGEIVHEVIP HLGYLHRCAE 
KIGEHLAPPQ WVPYTDRMDY LAAMNMNLGF SLTVEKLMSQ VAPPKAQLIR VFVAELNRIA
SHLLGMGAYG LDLGSFTPFL YGFREREIIL DLLEEVCGAR LTYSYVTPGG VTHDLPEAIP
IPPGLAMLTG RPAGATISWV DAVILFLDWL GPRIDDYHTL LTENHIFVQR TAGLGVLTRE
KAISYGCSGP VLRGSGVEFD LRRHGDKIYT SLYEKFEFDI PTAPFRNAPR EVIVGDNWCR
FYVRMLEVTQ SMRILRQAAD LWTIGGVSQD PAGHKVPYRL TTKLPAAEVY LETECPRGQM
GFYVIGNGAA EPLRTRAKSS SFCNLSVISE LCQGVLLADI PSIAGSLDIV MGEIDR