Gene Plim_1303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1303 
Symbol 
ID9137997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1663674 
End bp1664987 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content55% 
IMG OID 
ProductPhenylacetate--CoA ligase 
Protein accessionYP_003629336 
Protein GI296121558 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTCT CCTTTCCATC GCATCGGCAA GAACTTCTCG ATCAGCAGTT CGAGCGTCTG 
GCCAAACTTG TCGGTCGACT GGAGCACAAC GCCTTCTGGC AACCCAGGCT CAAATCAGCG
GAGTGGACAT CAGACAAACT TTCGTCCATC CCTCCGACTG CGGAAAACTT GCGAGCCCTG
CTGGATCGGC TGCCAATCGT TCGCAAAGCC GAGCTGGTGG CAGATCAGTT ACAAAACCCA
CCTTACGGCA CCAATCTTTC GTTTCCTCTT TCAGACTACG CGAGGTTACA TCAGACCTCC
GGCACGACCA CCGGGAAGCC TTTACGCTGG CTCGACACGC CGGAATCATG GGGCTGGATC
ATGTCGTGCT GGAAGCAGAT CTATGCACTT ATGGGGCTGC GAGCGACAGA TCGCCTGATA
TTCCCCTTTT CTTTTGGCCC GTTTCTCGGT TTTTGGGCAG GCTTCGAAGG GGCTGCACAG
ATGGGAAATC TTTGTCTGGC TGCTGGCGGT ATGAGCAGTG AAGCTCGTCT GAAACTCATC
GATGAAAATC AGATCACGAT TCTCGCCTGT ACTCCCACCT ATGCACTCCG GTTAGCCGAG
GTGGCCAGGC AGCAGGGGAT CGACCTGACA AAGTCATCTG TTCGCGCGAT TCTCGTGGCT
GGTGAACCCG GTGGAAATAT CCCAGCGACC CGACAACTGA TCGAAACCAC CTGGAATGCC
AGGGTTTTTG ATCATTGGGG CATGACTGAG GTGGGCCCGC TGGCCATGGA AACCGAACAT
GATCCCGGCT CGTTATCTGT GCTTGAGACA GAATGCATCG TTGAAATCCT CAATCCTGAG
ACTCATCGTG CCGTCGCAGA AGGAGAATCC GGAGAACTGG TCATCACGAA TCTGGGGCGA
GTCGGCTCAC CACTGCTTCG TTACGCCACA GGTGATATCG TGACACCATC CTGGCAGCGG
GTCGCAGGCG ATCCCCCTTT TGTCAGGCTC ATGGGTGGAA TCCAGGGCCG CACAGACGAT
ATGTGGATTA TCCGTGGCAA CAACGTCTTC CCCTCGAGTC TGGAAGCAAT CATTCGCTCG
ATACCGGAAG TGGAGGAATT CCAGCTTCGT GTTCATTCTC ACCGGCAGAT GCAGGAAGTG
AGTATACGGA TCGAATGCCG GCGCGGTCTC AGTGAGGCAG CATGTCAGAG TTGCGCCATG
AAAATTCGCC AGCAGATCAA AGAGCGGCAT CACTTCGAAG CCAGCATCGA ACTTGTCGAA
CCGGGAGTTC TGCCACGTTT CGAGATGAAG GCCAAACGAA TCATAACTGA ATAA
 
Protein sequence
MNVSFPSHRQ ELLDQQFERL AKLVGRLEHN AFWQPRLKSA EWTSDKLSSI PPTAENLRAL 
LDRLPIVRKA ELVADQLQNP PYGTNLSFPL SDYARLHQTS GTTTGKPLRW LDTPESWGWI
MSCWKQIYAL MGLRATDRLI FPFSFGPFLG FWAGFEGAAQ MGNLCLAAGG MSSEARLKLI
DENQITILAC TPTYALRLAE VARQQGIDLT KSSVRAILVA GEPGGNIPAT RQLIETTWNA
RVFDHWGMTE VGPLAMETEH DPGSLSVLET ECIVEILNPE THRAVAEGES GELVITNLGR
VGSPLLRYAT GDIVTPSWQR VAGDPPFVRL MGGIQGRTDD MWIIRGNNVF PSSLEAIIRS
IPEVEEFQLR VHSHRQMQEV SIRIECRRGL SEAACQSCAM KIRQQIKERH HFEASIELVE
PGVLPRFEMK AKRIITE