Gene Plim_1266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1266 
Symbol 
ID9137960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1622946 
End bp1624136 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content51% 
IMG OID 
Productglycosyl transferase group 1 
Protein accessionYP_003629299 
Protein GI296121521 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.583933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCG AACAATCTCG GATTCGTGTT CTGTGTGTGA TCGGCTCCAT GCATGGAGGA 
GGAGCAGAGA AGCAACTTTT CGAGATCCTG CATCGACTGA ACCGAAATCG ATTTGAACTC
GAACTCTATC TCTCCCACCG TGAAGGAGAA CTCCTGGAAA AGCTCCCGAC TGATATTCCG
ATCCACTCGT TCTGGGATGG GTATGCAGGC ACGATTCGCT CGAAGTGGGA TCATCTCTGG
GGAAGAACAG AGCAATCAAG AATCGGCCAC TTGGCTCAAA CAATTCATCG CAGGAAAATT
GATCTCGTTT ACGATCATTG CTATCTGGCG ACACTTGATG CAGCACAAGC CTCTTTCAAA
ACAAAAGTTC CCCGCGTTTC GGTAGCAGTG ATTGATCCTC AGAGTGAAGT TCACTTCTAC
TCAGGCGGTC ATCCGGCTGA CGAGTTGCAG AAAGCAAGCC AGGCCTATGC ATCTGCCGAT
GCTGTCATCG CTGTCTCTGA CGGAGTTAAA CGTGGCTTAA TCGCTGATCT CGCGGTTCCT
CCCGAGAAGA TTGAAGTCAT CTTTAACATG ATCGACGTCG AGAAGGCTCT CGAATTATCG
CTTGCCCCCG GGCCAGATTT TGAAGTCGAT CATTTCCATG TCGTGACTGT CGGACGCCTT
GTCGAACAAA AAGGCATCGA CATCGCGTTG GCCGCTATCG ACATTCTCGT GAATCAACGA
GGTTTGAAAA ACTTACGTTG GCATTTTGTG GGCGATGGCC CACTGAAAAA TGAATTGCAT
CAACTCGCTG TTAGCCTTGG TCTCGAACAG TACACCAAGT GGCATGGTTA TCAATCGAAC
CCCTACCCGT TTTACCGAGC AGCAAACCTG TTTGTGCTCC CCTCGCGGTA CGAAGGTTTT
GGGTGCGTGC TCATCGAAGC ACTTGCCTGT GGAATTCCAG TTGTGGCGAC CGATTGCCCT
AGTGGCCCGC GGGAAATTCT CGAAGATGGG CAATACGGCA CTCTCATACC TGTCGAAAGC
CCCCTCGATA TCGCAGATGC CGTTCAGAAA GCGGCCTCAC TTGCTCGATC GCCAGAAATG
GAAGCAGTAT CACAGCGAGC CTACGTCAGC AGCAGATTCT CATACGAAGC AGGGATCCCC
CGCATTGAGA CATTGTTCGA GCGTGTGATC GCCAGCCGAC GGTGCATCTA A
 
Protein sequence
MSSEQSRIRV LCVIGSMHGG GAEKQLFEIL HRLNRNRFEL ELYLSHREGE LLEKLPTDIP 
IHSFWDGYAG TIRSKWDHLW GRTEQSRIGH LAQTIHRRKI DLVYDHCYLA TLDAAQASFK
TKVPRVSVAV IDPQSEVHFY SGGHPADELQ KASQAYASAD AVIAVSDGVK RGLIADLAVP
PEKIEVIFNM IDVEKALELS LAPGPDFEVD HFHVVTVGRL VEQKGIDIAL AAIDILVNQR
GLKNLRWHFV GDGPLKNELH QLAVSLGLEQ YTKWHGYQSN PYPFYRAANL FVLPSRYEGF
GCVLIEALAC GIPVVATDCP SGPREILEDG QYGTLIPVES PLDIADAVQK AASLARSPEM
EAVSQRAYVS SRFSYEAGIP RIETLFERVI ASRRCI