| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1248 |
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| Symbol | |
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| ID | 9137942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 1600461 |
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| End bp | 1602002 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | TGF-beta receptor type I/II extracellular region |
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| Protein accession | YP_003629281 |
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| Protein GI | 296121503 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0301309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCGG CTTATCGCAC AGCACCAGAC CAGACCTTAA CCACCATGCC TCCGGGCATT
CCGTATATCA TCGGGAACGA AGCCGCCGAA CGGTTCAGCT TCTATGGCAT GAAGGCCATC
CTGTATCTGT ATCTCACAAA ATACATCGTG GATGCAGCGG GAGTATCGGC GGTCTATGAC
AAAGAAGATG CGACGGCCTT ATTGCATCTG TTCGTCGCGG CGGCTTATCT GTTCCCGATT
GTGGGTGGCC CACTTGCCGA TTTTTATCTC GGCAAGTACC GAGTCATCCT GTGGCTCTCC
TGGGCCTATT GCCTCGGTCA TCTTTCGCTC GCTGCGATTG ATGGGCGAAA TGGCCTCTGG
CTGGGACTGG CACTCATTGC CATGGGTGCG GGTGGTATCA AACCCTGCGT TTCGTCCCAT
GTCGGTGATC AATTTGGTCA GGGAAATCAG CATCTGATCA GCCGCATCTT CCGCTGGTTC
TACTTCGTGA TCAATGTCGG TGCTTTGGCG GCGATGTTCT GCATACCCCG CACGCGAGAC
ATCTTCCTCT CCCCGGAGAA CGGCCGGGCT TATCTGAAGT ACATTGTTCC TGCCGACTGG
CTAAACGCGA TTCTCCCTCA CTTCAGCCCG ACCTTGGCAC ACCACGTGGC CTTTGGGATT
CCGGGGGTCT TGATGCTTCT GGCCACGATT GTCTTCTGGA TGGGCCGCAA CAAATTCGTC
CACATCCCCC CATCAACCGA CGAATTCATG AAAGAACTCG AACCGATCCT GGAGCGAGCG
CCGTTTCTCA AGTATTTTCC ACCCATCATG TTCGTCGCCA TTTTCATGAA TCCCGAAAAC
CGGCGGGCGA TCTTGAAACT GCTGCCGCTT TTTGCATTCA TTGTCGTGTT CTGGGCGCTG
TTTGATCAGA CGATGTCCAC GTGGGTCGAG CAGGCGACGC ATATGAATTT GACTGTTCTC
CGCTGGCGCG ACTGGGAATG GAAAGTTCTG CCTGATGAAA CCCAGACGTT GAATCCTCTC
TTCGTGCTCA TGTTCATACC ACTGCTCGAT TTTGTGGTTT TCCCAGCCCT GGCAAAAGTG
GTTCAACTTT CGGCATTACG CCGTGTCTCG GTCGGTTTGT TTCTCGCCTC GATGGCCTTT
GCTGTCAGCG GCTTTATCCA GATGGAGATC GATCAGAACT TTACGCCCTG GGTGCTGTGG
CTTGTCTTTC CCTATGCCAT CATCACGGTT GCCGAAGTTC TCGTTTCGAC AACCTGCCTC
GAATTCTCCT ACACACAGGC TCCCAACCGA CTCAAGTCGA TCATCATGTC GCTCTACCTG
CTCTCAGTGT TCGGCGGCAA CCTGCTGACC TCCGGCGTCA ACTGGATGAT CTCCAGGGAT
GATGGGACCT CCATGCTTCC CGGGGCCAGC TATTACTGGT TCTTCTCGAT TCTTATGTTC
GTGACGGCGG TCTGCTTTAT CCCTTATGCA GTCCTGTATC GCGAATCGCG ATTTATTCAG
GGTGAAGACG CACCCACGGC TCCACAAGGC AAACGTAAAT AG
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| Protein sequence | MTAAYRTAPD QTLTTMPPGI PYIIGNEAAE RFSFYGMKAI LYLYLTKYIV DAAGVSAVYD
KEDATALLHL FVAAAYLFPI VGGPLADFYL GKYRVILWLS WAYCLGHLSL AAIDGRNGLW
LGLALIAMGA GGIKPCVSSH VGDQFGQGNQ HLISRIFRWF YFVINVGALA AMFCIPRTRD
IFLSPENGRA YLKYIVPADW LNAILPHFSP TLAHHVAFGI PGVLMLLATI VFWMGRNKFV
HIPPSTDEFM KELEPILERA PFLKYFPPIM FVAIFMNPEN RRAILKLLPL FAFIVVFWAL
FDQTMSTWVE QATHMNLTVL RWRDWEWKVL PDETQTLNPL FVLMFIPLLD FVVFPALAKV
VQLSALRRVS VGLFLASMAF AVSGFIQMEI DQNFTPWVLW LVFPYAIITV AEVLVSTTCL
EFSYTQAPNR LKSIIMSLYL LSVFGGNLLT SGVNWMISRD DGTSMLPGAS YYWFFSILMF
VTAVCFIPYA VLYRESRFIQ GEDAPTAPQG KRK
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