Gene Plim_1177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1177 
Symbol 
ID9137865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp1505796 
End bp1506431 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content54% 
IMG OID 
ProductUspA domain protein 
Protein accessionYP_003629211 
Protein GI296121433 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.368824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCCT CACGGGGTAA CATCTTTACT GTCATTGATA TGATTCGCCG CAGGGGCTTG 
CGCCGTCGCC TTGAAAAAGT GCTGATGGAT CGTGAGGCCC GGGCGATCGT GACCTTTATC 
TCCAACTTAC AGCCTGAGGA TGACACCGTG AAACTGCTGC TTTGTGTCGA TGCATCGGGA 
TCATCAGACC GAGCGATCTC CCGCGTGACT GAACTTGGTT TAGGCCACTC CAAGTCAAAC 
TCAGTGACAC TTTTTACAGT TTGCGAATCA CTTCCTGAGC ATGTCTTCGA AATCAGCGAA 
AAAGTGGGCA TGCACGCCAA TGAGCTTGCT TCGGCATGGT CGCAAAAATC GCGTTCGGCC 
GGAGAAGAGG CGTTGGCTCA AGCCAAGGCC AAGCTGCTGG AGAGTGGTCT GCCGGAATCA 
GCCATTCATA TCAAGCTGTA CGTCGCTGAT GCCACTCCTG AATCTCGCCA GGTGGCCGCC 
GCTGCCGGCC TGATCGAAGA GATGACCAGT GGGAACTACG ACCTGGTGGT CATTGGTCGC 
CGTGGTGCCA AACATCTCTC CGAAAACCTG ATTGGCAGTG TCGCCGATAA GGTGATTCGA 
GCCGCTTCAG GTCGAAGTGT CCTGCTGGTT GATTAG
 
Protein sequence
MEASRGNIFT VIDMIRRRGL RRRLEKVLMD REARAIVTFI SNLQPEDDTV KLLLCVDASG 
SSDRAISRVT ELGLGHSKSN SVTLFTVCES LPEHVFEISE KVGMHANELA SAWSQKSRSA 
GEEALAQAKA KLLESGLPES AIHIKLYVAD ATPESRQVAA AAGLIEEMTS GNYDLVVIGR 
RGAKHLSENL IGSVADKVIR AASGRSVLLV D