| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1174 |
|---|
| Symbol | |
|---|
| ID | 9137862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 1504436 |
|---|
| End bp | 1504855 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | heat shock protein Hsp20 |
|---|
| Protein accession | YP_003629208 |
|---|
| Protein GI | 296121430 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCTG AACAACCTGA GATTCCGTCC GGTCGAGCAT CACTCCGTCA CCCGGGAGAT
GCCGCTATTG AGCAGCCGGT CGAACAACAA GTGGTCTTCA CACCGCCGAT TGATATTTTC
GAGCGGCCGG ATGGCCTCAT TCTGCTGGCG GATCTGCCGG GTGTCACGCT GGAAACATTA
GAGCTGCAGG TTCAGGATAA CCGTTTAACA CTCTACGGTC GTGTTCAGAC TCAATGGCTG
GAAGGGGTCC AGACTCTTCA TCAGGAGTAT CCCATCGGGC ACTTTTTGAG ATCATTTATT
CTCAATGACG AAGTGGACCA CGAGAAAATC ACAGCCAGAC TCGCCCACGG CGTGCTGGAG
GTTTTCCTCC CCCGCGCGAC GAAGGCCATC CCCAGGAAGA TCGAAGTCAA AACCGACTGA
|
|---|
| Protein sequence | MRAEQPEIPS GRASLRHPGD AAIEQPVEQQ VVFTPPIDIF ERPDGLILLA DLPGVTLETL
ELQVQDNRLT LYGRVQTQWL EGVQTLHQEY PIGHFLRSFI LNDEVDHEKI TARLAHGVLE
VFLPRATKAI PRKIEVKTD
|
|---|
| |