Gene Plim_1127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1127 
Symbol 
ID9137814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1430808 
End bp1432007 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content56% 
IMG OID 
Productcell cycle protein 
Protein accessionYP_003629161 
Protein GI296121383 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGCA TCACAATCGG GCGCAATGTT TCGCCAACCA GCAGAAGTTC GTTTTCAATG 
ACGGGCTTTT TCTCGCACCC GTCGCTCATT CTCCTGGCTT GTGCATTCGG TCTTGTCGTC
CTGGGTCTCT GTGGCATTGC CCGGGCTGAT CAACTGCAGA CCGTCACGCC CCGGTACGAG
CGGCAGGTCG TCTGGCTCAT TCCGGCAGTG ATCGCGTTTG CTCTCGTCGT GGCCATTCCT
TACTCCCGCT GGAAGCGGTT CAGTGACTGG CTCTTTGTGG CCTCTCTGCC GCTCTTGGTG
CTGGTACTTG CCATGCCGCC TCGCAATGGG GCTCGAAGCT GGATTCCTTT GGGCATTCTC
GATTTCCAAC CCTCGGAAAT GGCCAAACTC ACCTTCATCA TGGCTTTGGC ACATTACCTG
ATGTACCGCG ATAATCATCG CACATTGCGC GGTTTAGTGA TCCCCTTTGT CGTCATGCTG
TTTCCCGTCG CACTCATCCT GCTGGAGCCA GATCTTGGCT CGGCAATGCT CTTTATCCCC
GTCCTCTTCA GCATGCTGTT TGTTGCGGGA GCAAGGGCCA GGCATCTGCT GGCGGTCATG
CTGCTGGCCG CCTGTCTGAT GCCTTTCTTC TGGCAGGGGA TGAATGCCGA GCAACGCTCA
CGGGTGACGG CACTTTTCAA TCAGACCGAT GGCGGGCCAG CCCCACGAGG TGACGGCTAT
CATCAACATC AGGCCAAGCA GGTCATCGCA CTGGGAGGCT TCTGGGGAAG TGAGCTCCAG
GGACAGTTGC TCGAAGAACC GGCCGCTTAT CACCTGCCCG CCGGCCAGAC TGACTTTGTG
TTCTGTATGG TCGCCGAACG TTTCGGCCTG GGTGGAGCTC TGGCGACGGT TGCTCTCTAT
GCCATCTTCC TGATGCAGGG CATGCAGATT TCGCAGCGAT GCAAAGAGCC TTATGGGCGA
TTAGTCGCCA CGGGCATCAC TGTGCTTCTG ATCACGCAAA TGATCATCAA CACAGGCATG
GCTGTCGGAT TACTGCCGAT CACAGGGATC ACGCTACCGC TCATGAGCTA CGGTGGTTCC
AGTTTAGTCG CCACCTCGAT CGCTCTGGCC ATGCTGGTCA ATATCGACTT GAATGGACGA
TCAGAAATTC AATCCGAGTC GTTCATGTTC AAGGATTTGA ATACCCGTTC CGGCAGTTGA
 
Protein sequence
MAGITIGRNV SPTSRSSFSM TGFFSHPSLI LLACAFGLVV LGLCGIARAD QLQTVTPRYE 
RQVVWLIPAV IAFALVVAIP YSRWKRFSDW LFVASLPLLV LVLAMPPRNG ARSWIPLGIL
DFQPSEMAKL TFIMALAHYL MYRDNHRTLR GLVIPFVVML FPVALILLEP DLGSAMLFIP
VLFSMLFVAG ARARHLLAVM LLAACLMPFF WQGMNAEQRS RVTALFNQTD GGPAPRGDGY
HQHQAKQVIA LGGFWGSELQ GQLLEEPAAY HLPAGQTDFV FCMVAERFGL GGALATVALY
AIFLMQGMQI SQRCKEPYGR LVATGITVLL ITQMIINTGM AVGLLPITGI TLPLMSYGGS
SLVATSIALA MLVNIDLNGR SEIQSESFMF KDLNTRSGS