| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1047 |
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| Symbol | |
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| ID | 9137733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 1322968 |
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| End bp | 1324461 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | |
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| Product | transposase IS4 family protein |
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| Protein accession | YP_003629086 |
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| Protein GI | 296121308 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.183518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTTA CTTCCAGAGC CCTCGGCAGA GATAGATCAT TTGAACTCGT GAAGCAGTCT
TTCTGGCAGG ACGAAGGTCT GCCGTTCTCG GATGCGCTGA CAACGCGGCA GTTGGAAGAG
GTTTTTGAGG CCGAAGAGGT CTCGTTTGGA AGAGACCCGT GCGTAAGCGA ACAGGCATCG
ATCGAGGATG GCGGGCTGGT CTACACACGC GGCGTGACGT TATGGGCCAT GCTCTCTCAA
GCCCTCTTCA CCGACGTTCA ACGAGCCTGT CGCGCGGCGG TTCAGCGCGT GGCGGTGTAC
TACGCTCTAT CGGGCATCAG AATCTCCTCG ACGAACACCG GTGCCTACTG TCGCGCGCGG
GCCAAGATTC CGGAAGGTGT CGTCCAGCGA CTGGCAGTCG GCGTCGGCCA GAGGTGTGAG
GCAGCGGTTC CCGACAAGTG GCGCTGGCAT GGATTCCGCA CGCTGGTCAT TGATGGCACC
ACATGCTCGA TGCCGGACAC CCAGGAGAAT CAGGCGGAGT ACCCTCAACC CTCTTCGCAG
GGGAAAGGCT TGGGATTTCC CATCCTGCGG GCCGTGGCCC TGACATCGCT CGCGACAGGG
ATGATTCTGG CTCTGGTGAC CGGTCCCTGT GCAGGAAAGG CGACCGGTGA GACGGCTCTG
TTTCGAACGT TGTTCGATCA GTTGAAAGCG GGTGATCTGG TGCTGTCAGA TCGGTACTAC
GGCGGCTGGT TCATGCTGGC ACTGCTGCAA GAACTGGGGG TCGAGTTTGT AACTCGGCTG
CACCAGTTTC GGATTGCAGA CTTCCACCAG GGGAAACGGC TGGGCCAGAG AGATCACGTC
GTGGCCTGGG CCAAACCGCA AAAGCCCGCG TGGCTCGATC AGGCAACCTA TGATCGTCTG
CCCGATCAGT TGGAAGTCCG TGAGATCGAG GTGCAGGTCC CCGTCCCCGG CTTCCGCACC
GCCTCCCTGG TGGTGGTCAC GTCGCTGCGA GATCACAGAC GTTTTCCACG GGAGGAACTG
GCCCTGCTCT ACCGCCGCCG GTGGACTGTG GAACTCGAAC TGCGAGACAT CAAGGCCACG
ATGGATCTGG CCGTCCTGCG CTGCACGAAA CCGGCATGGG TGCGACAAGA ACTCTGGACG
GGCCTGTTGG CGTATAACCT GATCCGTCAG TCCATGCTGC AGTCGGCACT GGGCGGCGAA
GTCCGACCCG AACAGTTGAG CTTTGCCGCA TCCTTAACAA ATGCTGGCCA ATATGTGGTT
GCTGGCCGCG ATGCCGCGCG ACCATACGAG AACCGATGTA GAACTCCTCA TTGTGCTGCG
AATGATCAAC GGTTATTCGC ATCGTGTCGG CCACCGCCCG GATCGAATGG AGCCCCGCGC
GGTCAAACGC CGCCCCAGTC CCATCGCCCT GCTCGCCGCA CCCCGCGAGG CCGCTCGCAA
TCAAGTCCTT GCGGGTATCA ATGGAAAGTG GTCAACGCGA TGACGCGTTG TTAA
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| Protein sequence | MSFTSRALGR DRSFELVKQS FWQDEGLPFS DALTTRQLEE VFEAEEVSFG RDPCVSEQAS
IEDGGLVYTR GVTLWAMLSQ ALFTDVQRAC RAAVQRVAVY YALSGIRISS TNTGAYCRAR
AKIPEGVVQR LAVGVGQRCE AAVPDKWRWH GFRTLVIDGT TCSMPDTQEN QAEYPQPSSQ
GKGLGFPILR AVALTSLATG MILALVTGPC AGKATGETAL FRTLFDQLKA GDLVLSDRYY
GGWFMLALLQ ELGVEFVTRL HQFRIADFHQ GKRLGQRDHV VAWAKPQKPA WLDQATYDRL
PDQLEVREIE VQVPVPGFRT ASLVVVTSLR DHRRFPREEL ALLYRRRWTV ELELRDIKAT
MDLAVLRCTK PAWVRQELWT GLLAYNLIRQ SMLQSALGGE VRPEQLSFAA SLTNAGQYVV
AGRDAARPYE NRCRTPHCAA NDQRLFASCR PPPGSNGAPR GQTPPQSHRP ARRTPRGRSQ
SSPCGYQWKV VNAMTRC
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